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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170121270
CENL01094544
35617
Alphaproteobacteria
TGA
Ser
>WENV170121078
CENL01046152
190614
Alphaproteobacteria
TGG
Pro
>WENV170121338
CENL01113252
482973
Alphaproteobacteria
TCC
Gly
>WENV170121048
CENL01041134
140876
Alphaproteobacteria
>WENV170121165
CENL01054539
400387
Alphaproteobacteria
GGT
Thr
>WENV170120999
CENL01035906
201940
Alphaproteobacteria
CAT
Met
>WENV170121105
CENL01050543
181926
Alphaproteobacteria
ACG
Arg
>WENV170120843
CENL01009181
400518
Alphaproteobacteria
GAA
Phe
>WENV170120882
CENL01014575
282977
Alphaproteobacteria
CAT
Met
>WENV170121176
CENL01054639
439135
Alphaproteobacteria
CAC
Val
>WENV170121171
CENL01054589
400514
Alphaproteobacteria
TTG
Gln
>WENV170120845
CENL01009327
431636
Alphaproteobacteria
CTC
Glu
>WENV170121049
CENL01041307
431636
Alphaproteobacteria
CTC
Glu
>WENV170121029
CENL01039436
180029
Alphaproteobacteria
CAT
Met
>WENV170120876
CENL01014029
118100
Alphaproteobacteria
GTA
Tyr
>WENV170120842
CENL01009132
29729
Alphaproteobacteria
GCT
Ser
>WENV170120961
CENL01029054
29729
Alphaproteobacteria
GCT
Ser
>WENV170121077
CENL01045913
179388
Alphaproteobacteria
GTG
His
>WENV170121277
CENL01097898
102146
Alphaproteobacteria
GTA
Tyr
>WENV170121040
CENL01040323
229285
Alphaproteobacteria
GGG
Pro
>WENV170121124
CENL01052500
76223
Alphaproteobacteria
CAG
Leu
>WENV170121157
CENL01054280
178728
Alphaproteobacteria
CGG
Pro
>WENV170121164
CENL01054539
432650
Alphaproteobacteria
GAA
Phe
>WENV170121030
CENL01039436
398994
Alphaproteobacteria
GTT
Asn
>WENV170121313
CENL01105042
283392
Alphaproteobacteria
TTT
Lys
>WENV170121173
CENL01054623
281676
Alphaproteobacteria
TAC
Val
>WENV170121034
CENL01039769
282981
Alphaproteobacteria
CCA
Trp
>WENV170120962
CENL01029202
404182
Alphaproteobacteria
CAC
Val
>WENV170121094
CENL01049333
32370
Alphaproteobacteria
TGA
Ser
>WENV170120927
CENL01024447
398996
Alphaproteobacteria
GCC
Gly
>WENV170121120
CENL01051985
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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