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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170176173
CEOS01047878
77010
Alphaproteobacteria
GAG
Leu
>WENV170175725
CEOS01001490
296698
Alphaproteobacteria
CGC
Ala
>WENV170176326
CEOS01063550
296698
Alphaproteobacteria
CGC
Ala
>WENV170176923
CEOS01139314
296698
Alphaproteobacteria
CGC
Ala
>WENV170176978
CEOS01143546
29627
Alphaproteobacteria
GGA
Ser
>WENV170176655
CEOS01106076
399001
Alphaproteobacteria
GAC
Val
>WENV170175983
CEOS01025971
282745
Alphaproteobacteria
TAC
Val
>WENV170176171
CEOS01047878
481048
Alphaproteobacteria
GCA
Cys
>WENV170175981
CEOS01025484
178050
Alphaproteobacteria
GTG
His
>WENV170175739
CEOS01002533
193463
Alphaproteobacteria
CCT
Arg
>WENV170176124
CEOS01042059
193463
Alphaproteobacteria
CCT
Arg
>WENV170176458
CEOS01079697
201940
Alphaproteobacteria
CAT
Met
>WENV170176669
CEOS01108268
201940
Alphaproteobacteria
CAT
Met
>WENV170176990
CEOS01144812
201940
Alphaproteobacteria
CAT
Met
>WENV170175874
CEOS01015859
400518
Alphaproteobacteria
GAA
Phe
>WENV170176505
CEOS01085363
400518
Alphaproteobacteria
GAA
Phe
>WENV170176287
CEOS01057481
400530
Alphaproteobacteria
GAC
Val
>WENV170177048
CEOS01160025
290043
Alphaproteobacteria
TGC
Ala
>WENV170176215
CEOS01051823
288727
Alphaproteobacteria
>WENV170176225
CEOS01052681
288727
Alphaproteobacteria
>WENV170176630
CEOS01101887
288727
Alphaproteobacteria
>WENV170176852
CEOS01131281
288727
Alphaproteobacteria
>WENV170176887
CEOS01135332
280784
Alphaproteobacteria
TGC
Ala
>WENV170176263
CEOS01055963
156124
Alphaproteobacteria
GGG
Pro
>WENV170176207
CEOS01050833
75222
Alphaproteobacteria
GAG
Leu
>WENV170176150
CEOS01045876
486348
Alphaproteobacteria
GCA
Cys
>WENV170176786
CEOS01123036
282748
Alphaproteobacteria
CGT
Thr
>WENV170175917
CEOS01018748
183632
Alphaproteobacteria
GGG
Pro
>WENV170176775
CEOS01121840
183632
Alphaproteobacteria
GGG
Pro
>WENV170176877
CEOS01133766
183632
Alphaproteobacteria
GGG
Pro
>WENV170175915
CEOS01018707
181950
Alphaproteobacteria
TCT
Arg
>WENV170176926
CEOS01139356
427571
Alphaproteobacteria
GCC
Gly
>WENV170176313
CEOS01062254
141247
Alphaproteobacteria
CAA
Leu
>WENV170176356
CEOS01067308
102146
Alphaproteobacteria
GTA
Tyr
>WENV170176722
CEOS01116844
102146
Alphaproteobacteria
GTA
Tyr
>WENV170176633
CEOS01102316
73167
Alphaproteobacteria
GAG
Leu
>WENV170175854
CEOS01014209
29610
Alphaproteobacteria
TGA
Ser
>WENV170175868
CEOS01015804
21542
Alphaproteobacteria
GGA
Ser
>WENV170176531
CEOS01089466
398998
Alphaproteobacteria
TTG
Gln
>WENV170175876
CEOS01016000
210458
Alphaproteobacteria
CGG
Pro
>WENV170176724
CEOS01116845
210458
Alphaproteobacteria
CGG
Pro
>WENV170176632
CEOS01102263
400419
Alphaproteobacteria
TTG
Gln
>WENV170175809
CEOS01009496
400517
Alphaproteobacteria
GGT
Thr
>WENV170176297
CEOS01059093
156060
Alphaproteobacteria
GGG
Pro
>WENV170176106
CEOS01039383
481098
Alphaproteobacteria
CTG
Gln
>WENV170176196
CEOS01049911
481098
Alphaproteobacteria
CTG
Gln
>WENV170176357
CEOS01067716
481098
Alphaproteobacteria
CTG
Gln
>WENV170176972
CEOS01143178
481098
Alphaproteobacteria
CTG
Gln
>WENV170176641
CEOS01103909
179419
Alphaproteobacteria
TGG
Pro
>WENV170176539
CEOS01090441
190625
Alphaproteobacteria
ACG
Arg
>WENV170176253
CEOS01055398
427428
Alphaproteobacteria
GCC
Gly
>WENV170176603
CEOS01098843
282658
Alphaproteobacteria
CGT
Thr
>WENV170176868
CEOS01133502
13331
Alphaproteobacteria
GCT
Ser
>WENV170175912
CEOS01018450
403581
Alphaproteobacteria
TTG
Gln
>WENV170176708
CEOS01114943
280785
Alphaproteobacteria
CCA
Trp
>WENV170175820
CEOS01010280
282981
Alphaproteobacteria
CCA
Trp
>WENV170175951
CEOS01022017
282981
Alphaproteobacteria
CCA
Trp
>WENV170176054
CEOS01033585
282981
Alphaproteobacteria
CCA
Trp
>WENV170176524
CEOS01087985
282981
Alphaproteobacteria
CCA
Trp
>WENV170176195
CEOS01049883
315852
Alphaproteobacteria
TGT
Thr
>WENV170176170
CEOS01047878
481099
Alphaproteobacteria
TCC
Gly
>WENV170176349
CEOS01066841
481099
Alphaproteobacteria
TCC
Gly
>WENV170176552
CEOS01092037
481099
Alphaproteobacteria
TCC
Gly
>WENV170176695
CEOS01113367
117918
Alphaproteobacteria
CAA
Leu
>WENV170175822
CEOS01010591
480900
Alphaproteobacteria
GCA
Cys
>WENV170176325
CEOS01063498
29739
Alphaproteobacteria
CGA
Ser
>WENV170176795
CEOS01123988
29739
Alphaproteobacteria
CGA
Ser
>WENV170176800
CEOS01124485
29739
Alphaproteobacteria
CGA
Ser
>WENV170177011
CEOS01145884
29739
Alphaproteobacteria
CGA
Ser
>WENV170176662
CEOS01107413
409749
Alphaproteobacteria
>WENV170176677
CEOS01109941
118150
Alphaproteobacteria
TAG
Leu
>WENV170176372
CEOS01069884
73523
Alphaproteobacteria
CAG
Leu
>WENV170176941
CEOS01140391
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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