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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170191621
CEPD01041301
77010
Alphaproteobacteria
GAG
Leu
>WENV170191956
CEPD01098553
399001
Alphaproteobacteria
GAC
Val
>WENV170191620
CEPD01041233
179894
Alphaproteobacteria
CCG
Arg
>WENV170191916
CEPD01084069
424450
Alphaproteobacteria
GGT
Thr
>WENV170191929
CEPD01087743
337513
Alphaproteobacteria
TGT
Thr
>WENV170191877
CEPD01073237
400518
Alphaproteobacteria
GAA
Phe
>WENV170191591
CEPD01036769
178731
Alphaproteobacteria
GTC
Asp
>WENV170191552
CEPD01033623
400516
Alphaproteobacteria
TTG
Gln
>WENV170191273
CEPD01004529
280784
Alphaproteobacteria
TGC
Ala
>WENV170191709
CEPD01053290
75222
Alphaproteobacteria
GAG
Leu
>WENV170191786
CEPD01062013
486348
Alphaproteobacteria
GCA
Cys
>WENV170191915
CEPD01083839
78115
Alphaproteobacteria
GAG
Leu
>WENV170191794
CEPD01063370
25643
Alphaproteobacteria
GGA
Ser
>WENV170191397
CEPD01015045
282977
Alphaproteobacteria
CAT
Met
>WENV170192126
CEPD01141640
178734
Alphaproteobacteria
TGG
Pro
>WENV170192122
CEPD01141399
121250
Alphaproteobacteria
TAG
Leu
>WENV170192125
CEPD01141640
178733
Alphaproteobacteria
CAT
Met
>WENV170191879
CEPD01073278
141247
Alphaproteobacteria
CAA
Leu
>WENV170191695
CEPD01049653
192275
Alphaproteobacteria
GTG
His
>WENV170191813
CEPD01065457
156060
Alphaproteobacteria
GGG
Pro
>WENV170191650
CEPD01044458
481098
Alphaproteobacteria
CTG
Gln
>WENV170191619
CEPD01041172
29408
Alphaproteobacteria
CGA
Ser
>WENV170191708
CEPD01053227
400048
Alphaproteobacteria
GGT
Thr
>WENV170191767
CEPD01058908
32168
Alphaproteobacteria
CGA
Ser
>WENV170191926
CEPD01087323
280785
Alphaproteobacteria
CCA
Trp
>WENV170192104
CEPD01138188
282981
Alphaproteobacteria
CCA
Trp
>WENV170191257
CEPD01003064
176633
Alphaproteobacteria
GAT
Ile
>WENV170191645
CEPD01043799
481099
Alphaproteobacteria
TCC
Gly
>WENV170192102
CEPD01137870
480900
Alphaproteobacteria
GCA
Cys
>WENV170191874
CEPD01072816
29739
Alphaproteobacteria
CGA
Ser
>WENV170191258
CEPD01003064
338616
Alphaproteobacteria
TGC
Ala
>WENV170191399
CEPD01015075
13340
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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