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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181567796
OGJK01000001
74725
Bacillota
CAG
Leu
>WENV181567797
OGJK01000001
13634
Bacillota
CGA
Ser
>WENV181567798
OGJK01000001
400904
Bacillota
CCT
Arg
>WENV181567966
OGJK01000188
284391
Bacillota
GTG
His
>WENV181567968
OGJK01000188
400905
Bacillota
CCG
Arg
>WENV181568017
OGJK01000311
398857
Bacillota
TTC
Glu
>WENV181568032
OGJK01000358
497729
Bacillota
CCA
Trp
>WENV181568040
OGJK01000372
25955
Bacillota
GCT
Ser
>WENV181568089
OGJK01000513
284389
Bacillota
CTT
Lys
>WENV181568115
OGJK01000569
398833
Bacillota
TGT
Thr
>WENV181568116
OGJK01000569
280444
Bacillota
GGT
Thr
>WENV181568164
OGJK01000731
27216
Bacillota
GCT
Ser
>WENV181568192
OGJK01000819
284390
Bacillota
CGT
Thr
>WENV181568232
OGJK01000926
118669
Bacillota
GTA
Tyr
>WENV181568329
OGJK01001450
53302
Bacillota
AAG
Leu
>WENV181568335
OGJK01001501
46835
Bacillota
TAA
Leu
>WENV181568375
OGJK01001743
73664
Bacillota
CAG
Leu
>WENV181568418
OGJK01002076
280492
Bacillota
CTT
Lys
>WENV181568421
OGJK01002093
48505
Bacillota
TGA
Ser
>WENV181568425
OGJK01002149
280473
Bacillota
TGG
Pro
>WENV181568430
OGJK01002196
398852
Bacillota
CTC
Glu
>WENV181568431
OGJK01002206
208539
Bacillota
TGG
Pro
>WENV181568432
OGJK01002206
480337
Bacillota
TCC
Gly
>WENV181568441
OGJK01002264
118359
Bacillota
GTA
Tyr
>WENV181568445
OGJK01002301
280547
Bacillota
GTC
Asp
>WENV181568446
OGJK01002301
291553
Bacillota
GAA
Phe
>WENV181568471
OGJK01002431
284627
Bacillota
GAA
Phe
>WENV181568491
OGJK01002604
280483
Bacillota
GAA
Phe
>WENV181568492
OGJK01002604
285756
Bacillota
GCC
Gly
>WENV181568529
OGJK01003043
280428
Bacillota
GAA
Phe
>WENV181568530
OGJK01003043
349107
Bacillota
GCC
Gly
>WENV181568533
OGJK01003061
332181
Bacillota
TGT
Thr
>WENV181568536
OGJK01003061
296855
Bacillota
GGT
Thr
>WENV181568537
OGJK01003061
184495
Bacillota
CAT
Met
>WENV181568538
OGJK01003072
480322
Bacillota
CTG
Gln
>WENV181568546
OGJK01003145
73009
Bacillota
CAG
Leu
>WENV181568552
OGJK01003226
73009
Bacillota
CAG
Leu
>WENV181568554
OGJK01003245
405363
Bacillota
GCA
Cys
>WENV181568555
OGJK01003245
99852
Bacillota
GTA
Tyr
>WENV181568556
OGJK01003250
141202
Bacillota
CAA
Leu
>WENV181568560
OGJK01003306
73664
Bacillota
CAG
Leu
>WENV181568576
OGJK01003538
20942
Bacillota
GGA
Ser
>WENV181568586
OGJK01003676
343590
Bacillota
GCC
Gly
>WENV181568616
OGJK01003971
99852
Bacillota
GTA
Tyr
>WENV181568624
OGJK01004090
175857
Bacillota
GTG
His
>WENV181568641
OGJK01004321
184537
Bacillota
ACG
Arg
>WENV181568700
OGJK01005446
27216
Bacillota
GCT
Ser
>WENV181568709
OGJK01005530
280473
Bacillota
TGG
Pro
>WENV181568710
OGJK01005554
119459
Bacillota
TAG
Leu
>WENV181568711
OGJK01005556
21311
Bacillota
GCT
Ser
>WENV181568713
OGJK01005580
280428
Bacillota
GAA
Phe
>WENV181568714
OGJK01005580
349107
Bacillota
GCC
Gly
>WENV181568715
OGJK01005580
280466
Bacillota
TAC
Val
>WENV181568717
OGJK01005580
284680
Bacillota
TTT
Lys
>WENV181568720
OGJK01005580
398935
Bacillota
>WENV181568721
OGJK01005580
53637
Bacillota
TAA
Leu
>WENV181568722
OGJK01005580
179130
Bacillota
ACG
Arg
>WENV181568738
OGJK01005908
280492
Bacillota
CTT
Lys
>WENV181568739
OGJK01005967
190476
Bacillota
CAT
Met
>WENV181568740
OGJK01005967
398832
Bacillota
TTC
Glu
>WENV181568741
OGJK01006024
280492
Bacillota
CTT
Lys
>WENV181568745
OGJK01006146
175859
Bacillota
TCT
Arg
>WENV181568758
OGJK01006528
56074
Bacillota
TGA
Ser
>WENV181568759
OGJK01006528
5692
Bacillota
GCT
Ser
>WENV181568789
OGJK01007680
175831
Bacillota
ACG
Arg
>WENV181568811
OGJK01008502
398854
Bacillota
CTC
Glu
>WENV181568812
OGJK01008502
175868
Bacillota
GTT
Asn
>WENV181568814
OGJK01008536
291576
Bacillota
CCC
Gly
>WENV181568821
OGJK01008809
117745
Bacillota
GTA
Tyr
>WENV181568823
OGJK01008885
46835
Bacillota
TAA
Leu
>WENV181568826
OGJK01009059
398852
Bacillota
CTC
Glu
>WENV181568827
OGJK01009063
20932
Bacillota
GCT
Ser
>WENV181568828
OGJK01009093
398852
Bacillota
CTC
Glu
>WENV181568829
OGJK01009101
303718
Bacillota
TGT
Thr
>WENV181568831
OGJK01009131
398852
Bacillota
CTC
Glu
>WENV181568841
OGJK01009540
480322
Bacillota
CTG
Gln
>WENV181568842
OGJK01009540
291581
Bacillota
CGG
Pro
>WENV181568848
OGJK01009931
280462
Bacillota
GAA
Phe
>WENV181568849
OGJK01009931
280463
Bacillota
TTT
Lys
>WENV181568871
OGJK01010883
73638
Bacillota
AAG
Leu
>WENV181568884
OGJK01011203
348419
Bacillota
GTT
Asn
>WENV181568886
OGJK01011259
179755
Bacillota
CCG
Arg
>WENV181568937
OGJK01013968
46643
Bacillota
TGA
Ser
>WENV181568963
OGJK01015511
333281
Bacillota
GTT
Asn
>WENV181568964
OGJK01015511
289761
Bacillota
TTT
Lys
>WENV181568965
OGJK01015511
432453
Bacillota
TTC
Glu
>WENV181568966
OGJK01015511
289715
Bacillota
TAC
Val
>WENV181569011
OGJK01017461
482593
Bacillota
CCC
Gly
>WENV181569016
OGJK01018139
56074
Bacillota
TGA
Ser
>WENV181569017
OGJK01018139
5692
Bacillota
GCT
Ser
>WENV181569024
OGJK01018503
480322
Bacillota
CTG
Gln
>WENV181569025
OGJK01018503
291581
Bacillota
CGG
Pro
>WENV181569041
OGJK01019786
175849
Bacillota
GTC
Asp
>WENV181569042
OGJK01019786
280444
Bacillota
GGT
Thr
>WENV181569062
OGJK01022125
339995
Bacillota
TGC
Ala
>WENV181569072
OGJK01023237
184497
Bacillota
GGG
Pro
>WENV181569091
OGJK01025495
289716
Bacillota
GTG
His
>WENV181569092
OGJK01025495
404091
Bacillota
TTG
Gln
>WENV181569105
OGJK01027454
175842
Bacillota
CAC
Val
>WENV181569133
OGJK01031861
298260
Bacillota
GTT
Asn
>WENV181569140
OGJK01033369
480324
Bacillota
TTG
Gln
>WENV181569150
OGJK01034870
356775
Bacillota
TGT
Thr
>WENV181569154
OGJK01035823
175868
Bacillota
GTT
Asn
>WENV181569194
OGJK01042758
201856
Bacillota
GAT
Ile
>WENV181569220
OGJK01049997
291634
Bacillota
GAA
Phe
>WENV181569238
OGJK01055023
484885
Bacillota
TCC
Gly
>WENV181569257
OGJK01061226
204381
Bacillota
GAT
Ile
>WENV181569266
OGJK01067430
186051
Bacillota
GAT
Ile
>WENV181569282
OGJK01075686
229015
Bacillota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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