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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181616416
OGLZ01000022
406186
Bacillota
CTC
Glu
>WENV181616422
OGLZ01000027
187364
Bacillota
CAT
Met
>WENV181616427
OGLZ01000030
82124
Bacillota
TAA
Leu
>WENV181616426
OGLZ01000030
118669
Bacillota
GTA
Tyr
>WENV181616435
OGLZ01000034
285756
Bacillota
GCC
Gly
>WENV181616470
OGLZ01000053
73664
Bacillota
CAG
Leu
>WENV181616489
OGLZ01000070
398833
Bacillota
TGT
Thr
>WENV181616505
OGLZ01000091
343590
Bacillota
GCC
Gly
>WENV181616506
OGLZ01000091
343590
Bacillota
GCC
Gly
>WENV181616507
OGLZ01000091
343590
Bacillota
GCC
Gly
>WENV181616511
OGLZ01000092
73009
Bacillota
CAG
Leu
>WENV181616510
OGLZ01000092
291581
Bacillota
CGG
Pro
>WENV181616509
OGLZ01000092
480322
Bacillota
CTG
Gln
>WENV181616508
OGLZ01000092
480324
Bacillota
TTG
Gln
>WENV181616514
OGLZ01000096
280444
Bacillota
GGT
Thr
>WENV181616513
OGLZ01000096
175849
Bacillota
GTC
Asp
>WENV181616515
OGLZ01000096
280473
Bacillota
TGG
Pro
>WENV181616524
OGLZ01000108
175868
Bacillota
GTT
Asn
>WENV181616523
OGLZ01000108
398854
Bacillota
CTC
Glu
>WENV181616535
OGLZ01000120
5692
Bacillota
GCT
Ser
>WENV181616534
OGLZ01000120
56074
Bacillota
TGA
Ser
>WENV181616547
OGLZ01000131
480322
Bacillota
CTG
Gln
>WENV181616550
OGLZ01000134
398857
Bacillota
TTC
Glu
>WENV181616563
OGLZ01000145
175842
Bacillota
CAC
Val
>WENV181616561
OGLZ01000145
175859
Bacillota
TCT
Arg
>WENV181616571
OGLZ01000153
483485
Bacillota
CCC
Gly
>WENV181616579
OGLZ01000174
280492
Bacillota
CTT
Lys
>WENV181616590
OGLZ01000186
284627
Bacillota
GAA
Phe
>WENV181616588
OGLZ01000186
118669
Bacillota
GTA
Tyr
>WENV181616598
OGLZ01000193
179755
Bacillota
CCG
Arg
>WENV181616597
OGLZ01000193
398832
Bacillota
TTC
Glu
>WENV181616628
OGLZ01000228
398833
Bacillota
TGT
Thr
>WENV181616641
OGLZ01000258
280447
Bacillota
GAC
Val
>WENV181616649
OGLZ01000267
175868
Bacillota
GTT
Asn
>WENV181616655
OGLZ01000276
280444
Bacillota
GGT
Thr
>WENV181616654
OGLZ01000276
175849
Bacillota
GTC
Asp
>WENV181616660
OGLZ01000285
117745
Bacillota
GTA
Tyr
>WENV181616662
OGLZ01000290
398852
Bacillota
CTC
Glu
>WENV181616668
OGLZ01000294
175868
Bacillota
GTT
Asn
>WENV181616678
OGLZ01000314
480322
Bacillota
CTG
Gln
>WENV181616681
OGLZ01000324
291576
Bacillota
CCC
Gly
>WENV181616683
OGLZ01000333
349107
Bacillota
GCC
Gly
>WENV181616687
OGLZ01000333
349107
Bacillota
GCC
Gly
>WENV181616686
OGLZ01000333
280428
Bacillota
GAA
Phe
>WENV181616684
OGLZ01000333
280466
Bacillota
TAC
Val
>WENV181616685
OGLZ01000333
175849
Bacillota
GTC
Asp
>WENV181616690
OGLZ01000338
280444
Bacillota
GGT
Thr
>WENV181616692
OGLZ01000339
291576
Bacillota
CCC
Gly
>WENV181616695
OGLZ01000350
5692
Bacillota
GCT
Ser
>WENV181616694
OGLZ01000350
56074
Bacillota
TGA
Ser
>WENV181616696
OGLZ01000353
280447
Bacillota
GAC
Val
>WENV181616717
OGLZ01000387
284627
Bacillota
GAA
Phe
>WENV181616720
OGLZ01000396
73009
Bacillota
CAG
Leu
>WENV181616724
OGLZ01000409
398852
Bacillota
CTC
Glu
>WENV181616725
OGLZ01000410
280462
Bacillota
GAA
Phe
>WENV181616729
OGLZ01000425
175859
Bacillota
TCT
Arg
>WENV181616731
OGLZ01000428
56079
Bacillota
AAG
Leu
>WENV181616741
OGLZ01000453
280447
Bacillota
GAC
Val
>WENV181616753
OGLZ01000516
175831
Bacillota
ACG
Arg
>WENV181616759
OGLZ01000537
175868
Bacillota
GTT
Asn
>WENV181616758
OGLZ01000537
398854
Bacillota
CTC
Glu
>WENV181616783
OGLZ01000708
179755
Bacillota
CCG
Arg
>WENV181616788
OGLZ01000744
179810
Bacillota
TCT
Arg
>WENV181616789
OGLZ01000744
175857
Bacillota
GTG
His
>WENV181616794
OGLZ01000759
497729
Bacillota
CCA
Trp
>WENV181616798
OGLZ01000797
280473
Bacillota
TGG
Pro
>WENV181616800
OGLZ01000799
398832
Bacillota
TTC
Glu
>WENV181616801
OGLZ01000802
99852
Bacillota
GTA
Tyr
>WENV181616813
OGLZ01000888
46643
Bacillota
TGA
Ser
>WENV181616820
OGLZ01000958
405363
Bacillota
GCA
Cys
>WENV181616819
OGLZ01000958
480324
Bacillota
TTG
Gln
>WENV181616825
OGLZ01001006
175842
Bacillota
CAC
Val
>WENV181616850
OGLZ01001245
175847
Bacillota
GTC
Asp
>WENV181616870
OGLZ01001477
291581
Bacillota
CGG
Pro
>WENV181616869
OGLZ01001477
480322
Bacillota
CTG
Gln
>WENV181616876
OGLZ01001532
46835
Bacillota
TAA
Leu
>WENV181616875
OGLZ01001532
175915
Bacillota
GTC
Asp
>WENV181616893
OGLZ01001829
99852
Bacillota
GTA
Tyr
>WENV181616914
OGLZ01002549
280447
Bacillota
GAC
Val
>WENV181616917
OGLZ01002571
73664
Bacillota
CAG
Leu
>WENV181616916
OGLZ01002571
56079
Bacillota
AAG
Leu
>WENV181616919
OGLZ01002579
280476
Bacillota
TTT
Lys
>WENV181616946
OGLZ01004917
280500
Bacillota
TGC
Ala
>WENV181616953
OGLZ01005321
183993
Bacillota
CAT
Met
>WENV181616955
OGLZ01005413
179176
Bacillota
ACG
Arg
>WENV181616971
OGLZ01007245
184522
Bacillota
CCT
Arg
>WENV181617000
OGLZ01011428
184497
Bacillota
GGG
Pro
>WENV181617008
OGLZ01012485
298260
Bacillota
GTT
Asn
>WENV181617018
OGLZ01012726
285556
Bacillota
TGT
Thr
>WENV181617020
OGLZ01012898
289476
Bacillota
CGT
Thr
>WENV181617021
OGLZ01013037
231532
Bacillota
ACG
Arg
>WENV181617037
OGLZ01015549
175825
Bacillota
GAT
Ile
>WENV181617036
OGLZ01015549
280436
Bacillota
TGC
Ala
>WENV181617042
OGLZ01016477
292374
Bacillota
TGC
Ala
>WENV181617041
OGLZ01016477
201856
Bacillota
GAT
Ile
>WENV181617043
OGLZ01016942
20913
Bacillota
GCT
Ser
>WENV181617056
OGLZ01018577
404076
Bacillota
GCC
Gly
>WENV181617060
OGLZ01018577
289472
Bacillota
TTC
Glu
>WENV181617061
OGLZ01018577
359682
Bacillota
TAC
Val
>WENV181617057
OGLZ01018577
289147
Bacillota
GTT
Asn
>WENV181617058
OGLZ01018577
403952
Bacillota
CTG
Gln
>WENV181617059
OGLZ01018577
289745
Bacillota
TTT
Lys
>WENV181617067
OGLZ01021447
47166
Bacillota
CGA
Ser
>WENV181617079
OGLZ01023360
480520
Bacillota
TCC
Gly
>WENV181617077
OGLZ01023360
141334
Bacillota
TAG
Leu
>WENV181617074
OGLZ01023360
330433
Bacillota
GTG
His
>WENV181617076
OGLZ01023360
354380
Bacillota
TTT
Lys
>WENV181617073
OGLZ01023360
203851
Bacillota
TCT
Arg
>WENV181617083
OGLZ01025263
184523
Bacillota
GAC
Val
>WENV181617084
OGLZ01026103
280646
Bacillota
TGC
Ala
>WENV181617088
OGLZ01027535
280561
Bacillota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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