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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182862675
OKPP01000226
282755
Bacillota
GGT
Thr
>WENV182862676
OKPP01000235
48505
Bacillota
TGA
Ser
>WENV182862682
OKPP01000310
208539
Bacillota
TGG
Pro
>WENV182862683
OKPP01000310
480337
Bacillota
TCC
Gly
>WENV182862684
OKPP01000310
184539
Bacillota
TCT
Arg
>WENV182862691
OKPP01000360
289713
Bacillota
TGT
Thr
>WENV182862694
OKPP01000360
296855
Bacillota
GGT
Thr
>WENV182862695
OKPP01000360
184495
Bacillota
CAT
Met
>WENV182862697
OKPP01000374
339995
Bacillota
TGC
Ala
>WENV182862700
OKPP01000398
20942
Bacillota
GGA
Ser
>WENV182862702
OKPP01000459
20932
Bacillota
GCT
Ser
>WENV182862706
OKPP01000506
280547
Bacillota
GTC
Asp
>WENV182862707
OKPP01000506
291553
Bacillota
GAA
Phe
>WENV182862711
OKPP01000637
140815
Bacillota
TAG
Leu
>WENV182862712
OKPP01000637
400112
Bacillota
GCC
Gly
>WENV182862713
OKPP01000637
480905
Bacillota
TCC
Gly
>WENV182862714
OKPP01000637
282756
Bacillota
CTT
Lys
>WENV182862717
OKPP01000667
178065
Bacillota
ACG
Arg
>WENV182862730
OKPP01000905
282751
Bacillota
TGC
Ala
>WENV182862735
OKPP01001059
400111
Bacillota
GTT
Asn
>WENV182862738
OKPP01001122
400110
Bacillota
CCT
Arg
>WENV182862739
OKPP01001127
20943
Bacillota
CGA
Ser
>WENV182862740
OKPP01001140
141202
Bacillota
CAA
Leu
>WENV182862745
OKPP01001279
317820
Bacillota
TAC
Val
>WENV182862753
OKPP01001496
119459
Bacillota
TAG
Leu
>WENV182862754
OKPP01001520
282758
Bacillota
CCA
Trp
>WENV182862755
OKPP01001520
318172
Bacillota
CCA
Trp
>WENV182862760
OKPP01001784
20360
Bacillota
TGA
Ser
>WENV182862761
OKPP01001784
20361
Bacillota
GCT
Ser
>WENV182862765
OKPP01001974
176771
Bacillota
TCT
Arg
>WENV182862766
OKPP01001974
282757
Bacillota
GTG
His
>WENV182862767
OKPP01001974
400113
Bacillota
TTG
Gln
>WENV182862768
OKPP01002005
280871
Bacillota
GAA
Phe
>WENV182862770
OKPP01002077
178066
Bacillota
CAT
Met
>WENV182862771
OKPP01002077
46663
Bacillota
TAA
Leu
>WENV182862777
OKPP01002244
289716
Bacillota
GTG
His
>WENV182862778
OKPP01002244
404091
Bacillota
TTG
Gln
>WENV182862779
OKPP01002244
289761
Bacillota
TTT
Lys
>WENV182862781
OKPP01002347
178067
Bacillota
TCG
Arg
>WENV182862784
OKPP01002630
328987
Bacillota
TGG
Pro
>WENV182862786
OKPP01002792
282754
Bacillota
TGT
Thr
>WENV182862787
OKPP01002792
100097
Bacillota
GTA
Tyr
>WENV182862788
OKPP01002792
282753
Bacillota
TAC
Val
>WENV182862789
OKPP01002792
282754
Bacillota
TGT
Thr
>WENV182862790
OKPP01002792
100097
Bacillota
GTA
Tyr
>WENV182862791
OKPP01002792
282754
Bacillota
TGT
Thr
>WENV182862792
OKPP01002792
100097
Bacillota
GTA
Tyr
>WENV182862797
OKPP01002921
289717
Bacillota
CTT
Lys
>WENV182862815
OKPP01005266
291558
Bacillota
CTT
Lys
>WENV182862816
OKPP01005518
344985
Bacillota
GAA
Phe
>WENV182862819
OKPP01005980
408781
Bacillota
TTG
Gln
>WENV182862821
OKPP01005980
141334
Bacillota
TAG
Leu
>WENV182862823
OKPP01005980
497761
Bacillota
TCC
Gly
>WENV182862824
OKPP01005980
203851
Bacillota
TCT
Arg
>WENV182862825
OKPP01005980
330433
Bacillota
GTG
His
>WENV182862826
OKPP01005980
408781
Bacillota
TTG
Gln
>WENV182862829
OKPP01006032
333281
Bacillota
GTT
Asn
>WENV182862830
OKPP01006032
432453
Bacillota
TTC
Glu
>WENV182862831
OKPP01006032
289715
Bacillota
TAC
Val
>WENV182862832
OKPP01006046
399266
Bacillota
>WENV182862833
OKPP01006046
399266
Bacillota
>WENV182862834
OKPP01006070
291629
Bacillota
CCA
Trp
>WENV182862837
OKPP01006256
399261
Bacillota
>WENV182862839
OKPP01006256
399260
Bacillota
TGT
Thr
>WENV182862840
OKPP01006256
120584
Bacillota
GTA
Tyr
>WENV182862843
OKPP01007078
399041
Bacillota
CCA
Trp
>WENV182862844
OKPP01007114
415856
Bacillota
CCT
Arg
>WENV182862864
OKPP01012831
482593
Bacillota
CCC
Gly
>WENV182862868
OKPP01013199
100098
Bacillota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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