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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
175 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183704174
PDWI01000062
158247
Bacillota
>WENV183713023
PDWI01122024
37213
Bacillota
TGA
Ser
>WENV183709880
PDWI01035768
280493
Bacillota
CCA
Trp
>WENV183705423
PDWI01001534
16430
Bacillota
GCT
Ser
>WENV183705712
PDWI01002165
261586
Bacillota
TAC
Val
>WENV183704311
PDWI01000151
359540
Bacillota
GTT
Asn
>WENV183706026
PDWI01002937
359540
Bacillota
GTT
Asn
>WENV183709499
PDWI01029180
359540
Bacillota
GTT
Asn
>WENV183711478
PDWI01070805
359540
Bacillota
GTT
Asn
>WENV183709074
PDWI01023483
412448
Bacillota
TCC
Gly
>WENV183707164
PDWI01007151
412448
Bacillota
TCC
Gly
>WENV183716016
PDWI01280000
173811
Bacillota
GTC
Asp
>WENV183707901
PDWI01011340
173811
Bacillota
GTC
Asp
>WENV183716382
PDWI01305076
359525
Bacillota
>WENV183714366
PDWI01179971
359525
Bacillota
>WENV183711534
PDWI01072258
359525
Bacillota
>WENV183710752
PDWI01052889
359525
Bacillota
>WENV183709676
PDWI01032020
359525
Bacillota
>WENV183708126
PDWI01013235
359525
Bacillota
>WENV183707115
PDWI01006816
359525
Bacillota
>WENV183706757
PDWI01005437
359525
Bacillota
>WENV183706296
PDWI01003688
359525
Bacillota
>WENV183705979
PDWI01002811
359525
Bacillota
>WENV183705110
PDWI01001047
359525
Bacillota
>WENV183715962
PDWI01276643
114359
Bacillota
TAG
Leu
>WENV183713703
PDWI01149719
184487
Bacillota
CAT
Met
>WENV183704260
PDWI01000122
293599
Bacillota
CTT
Lys
>WENV183715516
PDWI01245213
37083
Bacillota
TGA
Ser
>WENV183711286
PDWI01065233
37083
Bacillota
TGA
Ser
>WENV183715813
PDWI01264396
144668
Bacillota
GTC
Asp
>WENV183714982
PDWI01214502
144668
Bacillota
GTC
Asp
>WENV183714855
PDWI01206692
144668
Bacillota
GTC
Asp
>WENV183714503
PDWI01187742
144668
Bacillota
GTC
Asp
>WENV183712625
PDWI01107571
144668
Bacillota
GTC
Asp
>WENV183710705
PDWI01052119
144668
Bacillota
GTC
Asp
>WENV183709503
PDWI01029180
362119
Bacillota
GCC
Gly
>WENV183709882
PDWI01035768
173314
Bacillota
GAT
Ile
>WENV183714382
PDWI01181020
338531
Bacillota
GCC
Gly
>WENV183713450
PDWI01138982
338531
Bacillota
GCC
Gly
>WENV183713300
PDWI01133259
338531
Bacillota
GCC
Gly
>WENV183713202
PDWI01128955
338531
Bacillota
GCC
Gly
>WENV183713033
PDWI01122223
338531
Bacillota
GCC
Gly
>WENV183711803
PDWI01081014
338531
Bacillota
GCC
Gly
>WENV183711769
PDWI01079863
338531
Bacillota
GCC
Gly
>WENV183711768
PDWI01079863
338531
Bacillota
GCC
Gly
>WENV183711027
PDWI01059227
338531
Bacillota
GCC
Gly
>WENV183710486
PDWI01047504
338531
Bacillota
GCC
Gly
>WENV183710471
PDWI01047299
338531
Bacillota
GCC
Gly
>WENV183708690
PDWI01018821
338531
Bacillota
GCC
Gly
>WENV183708215
PDWI01013901
338531
Bacillota
GCC
Gly
>WENV183708212
PDWI01013901
338531
Bacillota
GCC
Gly
>WENV183707743
PDWI01010359
338531
Bacillota
GCC
Gly
>WENV183707431
PDWI01008381
338531
Bacillota
GCC
Gly
>WENV183707303
PDWI01007801
338531
Bacillota
GCC
Gly
>WENV183707099
PDWI01006686
338531
Bacillota
GCC
Gly
>WENV183707064
PDWI01006561
338531
Bacillota
GCC
Gly
>WENV183706845
PDWI01005719
338531
Bacillota
GCC
Gly
>WENV183706765
PDWI01005437
338531
Bacillota
GCC
Gly
>WENV183706522
PDWI01004545
338531
Bacillota
GCC
Gly
>WENV183706520
PDWI01004545
338531
Bacillota
GCC
Gly
>WENV183705998
PDWI01002862
338531
Bacillota
GCC
Gly
>WENV183705098
PDWI01001019
338531
Bacillota
GCC
Gly
>WENV183712355
PDWI01097057
339717
Bacillota
TTC
Glu
>WENV183708426
PDWI01015998
339717
Bacillota
TTC
Glu
>WENV183707169
PDWI01007151
348433
Bacillota
TTC
Glu
>WENV183709075
PDWI01023483
253195
Bacillota
TTT
Lys
>WENV183707889
PDWI01011283
253195
Bacillota
TTT
Lys
>WENV183707167
PDWI01007151
253195
Bacillota
TTT
Lys
>WENV183706521
PDWI01004545
253195
Bacillota
TTT
Lys
>WENV183706066
PDWI01003018
253195
Bacillota
TTT
Lys
>WENV183713516
PDWI01141337
37307
Bacillota
TGA
Ser
>WENV183707204
PDWI01007263
37307
Bacillota
TGA
Ser
>WENV183705984
PDWI01002811
37307
Bacillota
TGA
Ser
>WENV183710650
PDWI01050771
154711
Bacillota
TGG
Pro
>WENV183707286
PDWI01007723
154711
Bacillota
TGG
Pro
>WENV183707284
PDWI01007723
154711
Bacillota
TGG
Pro
>WENV183704397
PDWI01000200
154711
Bacillota
TGG
Pro
>WENV183715413
PDWI01239411
429518
Bacillota
TCC
Gly
>WENV183715071
PDWI01219963
429518
Bacillota
TCC
Gly
>WENV183714538
PDWI01189595
429518
Bacillota
TCC
Gly
>WENV183713631
PDWI01146066
429518
Bacillota
TCC
Gly
>WENV183712852
PDWI01116240
429518
Bacillota
TCC
Gly
>WENV183711662
PDWI01075675
429518
Bacillota
TCC
Gly
>WENV183711077
PDWI01060712
429518
Bacillota
TCC
Gly
>WENV183709706
PDWI01032303
429518
Bacillota
TCC
Gly
>WENV183707886
PDWI01011283
429518
Bacillota
TCC
Gly
>WENV183707870
PDWI01011205
429518
Bacillota
TCC
Gly
>WENV183707226
PDWI01007479
429518
Bacillota
TCC
Gly
>WENV183707201
PDWI01007263
429518
Bacillota
TCC
Gly
>WENV183706571
PDWI01004723
429518
Bacillota
TCC
Gly
>WENV183706064
PDWI01003018
429518
Bacillota
TCC
Gly
>WENV183704710
PDWI01000535
429518
Bacillota
TCC
Gly
>WENV183715376
PDWI01237715
249522
Bacillota
TAC
Val
>WENV183710716
PDWI01052187
249522
Bacillota
TAC
Val
>WENV183705487
PDWI01001654
249522
Bacillota
TAC
Val
>WENV183714704
PDWI01198925
359755
Bacillota
>WENV183712247
PDWI01093494
359755
Bacillota
>WENV183707019
PDWI01006388
359755
Bacillota
>WENV183707410
PDWI01008303
157838
Bacillota
GTC
Asp
>WENV183707273
PDWI01007723
157838
Bacillota
GTC
Asp
>WENV183705881
PDWI01002517
157838
Bacillota
GTC
Asp
>WENV183704386
PDWI01000200
157838
Bacillota
GTC
Asp
>WENV183714542
PDWI01189595
235291
Bacillota
TTT
Lys
>WENV183713877
PDWI01157702
235291
Bacillota
TTT
Lys
>WENV183713034
PDWI01122223
235291
Bacillota
TTT
Lys
>WENV183710472
PDWI01047299
235291
Bacillota
TTT
Lys
>WENV183707874
PDWI01011205
235291
Bacillota
TTT
Lys
>WENV183707227
PDWI01007479
235291
Bacillota
TTT
Lys
>WENV183707203
PDWI01007263
235291
Bacillota
TTT
Lys
>WENV183707100
PDWI01006686
235291
Bacillota
TTT
Lys
>WENV183706846
PDWI01005719
235291
Bacillota
TTT
Lys
>WENV183706575
PDWI01004723
235291
Bacillota
TTT
Lys
>WENV183706467
PDWI01004368
235291
Bacillota
TTT
Lys
>WENV183705813
PDWI01002325
235291
Bacillota
TTT
Lys
>WENV183705099
PDWI01001019
235291
Bacillota
TTT
Lys
>WENV183704714
PDWI01000535
235291
Bacillota
TTT
Lys
>WENV183711948
PDWI01084453
144672
Bacillota
TCT
Arg
>WENV183709680
PDWI01032020
429578
Bacillota
GCA
Cys
>WENV183713503
PDWI01141139
287296
Bacillota
TTT
Lys
>WENV183716109
PDWI01286900
190106
Bacillota
TGG
Pro
>WENV183716095
PDWI01286174
190106
Bacillota
TGG
Pro
>WENV183716045
PDWI01282777
190106
Bacillota
TGG
Pro
>WENV183715992
PDWI01278740
190106
Bacillota
TGG
Pro
>WENV183715883
PDWI01270280
190106
Bacillota
TGG
Pro
>WENV183715655
PDWI01253560
190106
Bacillota
TGG
Pro
>WENV183715432
PDWI01240228
190106
Bacillota
TGG
Pro
>WENV183715070
PDWI01219963
190106
Bacillota
TGG
Pro
>WENV183714838
PDWI01206104
190106
Bacillota
TGG
Pro
>WENV183714692
PDWI01198114
190106
Bacillota
TGG
Pro
>WENV183714624
PDWI01195043
190106
Bacillota
TGG
Pro
>WENV183714537
PDWI01189595
190106
Bacillota
TGG
Pro
>WENV183714269
PDWI01175699
190106
Bacillota
TGG
Pro
>WENV183713630
PDWI01146066
190106
Bacillota
TGG
Pro
>WENV183713153
PDWI01126985
190106
Bacillota
TGG
Pro
>WENV183712851
PDWI01116240
190106
Bacillota
TGG
Pro
>WENV183712812
PDWI01114693
190106
Bacillota
TGG
Pro
>WENV183712708
PDWI01111025
190106
Bacillota
TGG
Pro
>WENV183711661
PDWI01075675
190106
Bacillota
TGG
Pro
>WENV183711563
PDWI01073080
190106
Bacillota
TGG
Pro
>WENV183711060
PDWI01060347
190106
Bacillota
TGG
Pro
>WENV183710373
PDWI01045184
190106
Bacillota
TGG
Pro
>WENV183710319
PDWI01044053
190106
Bacillota
TGG
Pro
>WENV183709784
PDWI01034019
190106
Bacillota
TGG
Pro
>WENV183709705
PDWI01032303
190106
Bacillota
TGG
Pro
>WENV183709564
PDWI01030257
190106
Bacillota
TGG
Pro
>WENV183709275
PDWI01026334
190106
Bacillota
TGG
Pro
>WENV183708909
PDWI01021283
190106
Bacillota
TGG
Pro
>WENV183708814
PDWI01020144
190106
Bacillota
TGG
Pro
>WENV183708513
PDWI01016924
190106
Bacillota
TGG
Pro
>WENV183708246
PDWI01014096
190106
Bacillota
TGG
Pro
>WENV183708081
PDWI01012827
190106
Bacillota
TGG
Pro
>WENV183707885
PDWI01011283
190106
Bacillota
TGG
Pro
>WENV183707880
PDWI01011254
190106
Bacillota
TGG
Pro
>WENV183707869
PDWI01011205
190106
Bacillota
TGG
Pro
>WENV183707617
PDWI01009392
190106
Bacillota
TGG
Pro
>WENV183707414
PDWI01008305
190106
Bacillota
TGG
Pro
>WENV183707385
PDWI01008177
190106
Bacillota
TGG
Pro
>WENV183707175
PDWI01007151
190106
Bacillota
TGG
Pro
>WENV183706929
PDWI01005986
190106
Bacillota
TGG
Pro
>WENV183706570
PDWI01004723
190106
Bacillota
TGG
Pro
>WENV183706453
PDWI01004295
190106
Bacillota
TGG
Pro
>WENV183706107
PDWI01003107
190106
Bacillota
TGG
Pro
>WENV183706063
PDWI01003018
190106
Bacillota
TGG
Pro
>WENV183705848
PDWI01002409
190106
Bacillota
TGG
Pro
>WENV183705426
PDWI01001534
190106
Bacillota
TGG
Pro
>WENV183704841
PDWI01000684
190106
Bacillota
TGG
Pro
>WENV183704709
PDWI01000535
190106
Bacillota
TGG
Pro
>WENV183704514
PDWI01000327
190106
Bacillota
TGG
Pro
>WENV183711954
PDWI01084453
237691
Bacillota
>WENV183710466
PDWI01047189
148144
Bacillota
CAT
Met
>WENV183706128
PDWI01003187
148144
Bacillota
CAT
Met
>WENV183716290
PDWI01299511
292012
Bacillota
TGC
Ala
>WENV183716173
PDWI01291866
292012
Bacillota
TGC
Ala
>WENV183714705
PDWI01198984
292012
Bacillota
TGC
Ala
>WENV183715412
PDWI01239411
96671
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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