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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181046687
ODXX01000572
251411
Bacteroidota
GAA
Phe
>WENV181046688
ODXX01000572
251411
Bacteroidota
GAA
Phe
>WENV181046720
ODXX01000912
412439
Bacteroidota
CCA
Trp
>WENV181046727
ODXX01001681
49158
Bacteroidota
GCT
Ser
>WENV181046728
ODXX01001681
128249
Bacteroidota
TGG
Pro
>WENV181046729
ODXX01001681
176247
Bacteroidota
TCT
Arg
>WENV181046731
ODXX01001816
179315
Bacteroidota
TGC
Ala
>WENV181046762
ODXX01003081
147941
Bacteroidota
TGT
Thr
>WENV181046764
ODXX01003081
268513
Bacteroidota
TCC
Gly
>WENV181046775
ODXX01003828
28036
Bacteroidota
GGA
Ser
>WENV181046778
ODXX01004123
147945
Bacteroidota
CAT
Met
>WENV181046818
ODXX01007165
147942
Bacteroidota
GTC
Asp
>WENV181046823
ODXX01007818
144639
Bacteroidota
GGC
Ala
>WENV181046834
ODXX01009419
340029
Bacteroidota
TTC
Glu
>WENV181046835
ODXX01009509
104003
Bacteroidota
TAG
Leu
>WENV181046861
ODXX01012334
148247
Bacteroidota
TGC
Ala
>WENV181046870
ODXX01013778
130479
Bacteroidota
TAC
Val
>WENV181046871
ODXX01013778
133943
Bacteroidota
TAC
Val
>WENV181046872
ODXX01013789
81773
Bacteroidota
CAG
Leu
>WENV181046906
ODXX01018862
127951
Bacteroidota
TAC
Val
>WENV181046926
ODXX01026341
238671
Bacteroidota
TTT
Lys
>WENV181046946
ODXX01031911
97610
Bacteroidota
GTA
Tyr
>WENV181046951
ODXX01032268
151121
Bacteroidota
CAT
Met
>WENV181047005
ODXX01054590
242581
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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