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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183730206
PJTR01004599
248752
Betaproteobacteria
GCC
Gly
>WENV183730198
PJTR01003215
319206
Betaproteobacteria
TGC
Ala
>WENV183730078
PJTR01000541
9962
Betaproteobacteria
GCT
Ser
>WENV183730099
PJTR01000664
146768
Betaproteobacteria
CAT
Met
>WENV183730098
PJTR01000618
400411
Betaproteobacteria
GGT
Thr
>WENV183730181
PJTR01002373
61762
Betaproteobacteria
TAA
Leu
>WENV183730135
PJTR01001137
145695
Betaproteobacteria
GGG
Pro
>WENV183730169
PJTR01001950
316959
Betaproteobacteria
CTT
Lys
>WENV183730145
PJTR01001300
238346
Betaproteobacteria
CGT
Thr
>WENV183730192
PJTR01002918
238587
Betaproteobacteria
TAC
Val
>WENV183730113
PJTR01000787
292518
Betaproteobacteria
TTT
Lys
>WENV183730170
PJTR01001950
238349
Betaproteobacteria
CTT
Lys
>WENV183729964
PJTR01000251
2139
Betaproteobacteria
>WENV183730112
PJTR01000785
17930
Betaproteobacteria
GGA
Ser
>WENV183730177
PJTR01002096
4869
Betaproteobacteria
GCT
Ser
>WENV183730243
PJTR01006919
147855
Betaproteobacteria
TTG
Gln
>WENV183730131
PJTR01001075
151824
Betaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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