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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183742111
PJUH01000315
146896
Betaproteobacteria
TTG
Gln
>WENV183742020
PJUH01000071
303627
Betaproteobacteria
TTT
Lys
>WENV183742108
PJUH01000306
145694
Betaproteobacteria
ACG
Arg
>WENV183742109
PJUH01000306
145694
Betaproteobacteria
ACG
Arg
>WENV183741901
PJUH01000003
16378
Betaproteobacteria
GGA
Ser
>WENV183742031
PJUH01000085
45122
Betaproteobacteria
TGA
Ser
>WENV183741913
PJUH01000006
412167
Betaproteobacteria
GCA
Cys
>WENV183742016
PJUH01000056
251202
Betaproteobacteria
TGT
Thr
>WENV183741991
PJUH01000031
95951
Betaproteobacteria
CAA
Leu
>WENV183741974
PJUH01000023
339484
Betaproteobacteria
CCT
Arg
>WENV183742025
PJUH01000076
2139
Betaproteobacteria
>WENV183741908
PJUH01000006
95934
Betaproteobacteria
GAG
Leu
>WENV183741953
PJUH01000015
313750
Betaproteobacteria
TAC
Val
>WENV183742170
PJUH01000903
387094
Betaproteobacteria
GGT
Thr
>WENV183741900
PJUH01000003
339485
Betaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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