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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183718678
PDWJ01005819
161528
Campylobacterota
CAT
Met
>WENV183720001
PDWJ01024513
161528
Campylobacterota
CAT
Met
>WENV183721028
PDWJ01052698
161528
Campylobacterota
CAT
Met
>WENV183720914
PDWJ01049179
253656
Campylobacterota
CCA
Trp
>WENV183721794
PDWJ01087079
253656
Campylobacterota
CCA
Trp
>WENV183718980
PDWJ01008358
155988
Campylobacterota
TCT
Arg
>WENV183721139
PDWJ01056412
191925
Campylobacterota
GTC
Asp
>WENV183721736
PDWJ01083259
191925
Campylobacterota
GTC
Asp
>WENV183719020
PDWJ01008865
355138
Campylobacterota
GCC
Gly
>WENV183720277
PDWJ01030692
338365
Campylobacterota
GGT
Thr
>WENV183720879
PDWJ01048065
152142
Campylobacterota
GAT
Ile
>WENV183722241
PDWJ01114499
149512
Campylobacterota
GAT
Ile
>WENV183721420
PDWJ01068437
149512
Campylobacterota
GAT
Ile
>WENV183721238
PDWJ01060381
149517
Campylobacterota
TGT
Thr
>WENV183719652
PDWJ01017959
149517
Campylobacterota
TGT
Thr
>WENV183719436
PDWJ01014112
149517
Campylobacterota
TGT
Thr
>WENV183722614
PDWJ01143325
127427
Campylobacterota
TGG
Pro
>WENV183719806
PDWJ01020635
127427
Campylobacterota
TGG
Pro
>WENV183722414
PDWJ01126922
61323
Campylobacterota
TAA
Leu
>WENV183722119
PDWJ01106801
61323
Campylobacterota
TAA
Leu
>WENV183721140
PDWJ01056424
61323
Campylobacterota
TAA
Leu
>WENV183719525
PDWJ01015588
61323
Campylobacterota
TAA
Leu
>WENV183718270
PDWJ01003114
61323
Campylobacterota
TAA
Leu
>WENV183721573
PDWJ01075748
189231
Campylobacterota
TCT
Arg
>WENV183721029
PDWJ01052698
157046
Campylobacterota
TCC
Gly
>WENV183720112
PDWJ01026725
157046
Campylobacterota
TCC
Gly
>WENV183720002
PDWJ01024513
157046
Campylobacterota
TCC
Gly
>WENV183719654
PDWJ01017959
157046
Campylobacterota
TCC
Gly
>WENV183719587
PDWJ01016770
157046
Campylobacterota
TCC
Gly
>WENV183719438
PDWJ01014112
157046
Campylobacterota
TCC
Gly
>WENV183718716
PDWJ01006013
157046
Campylobacterota
TCC
Gly
>WENV183718679
PDWJ01005819
157046
Campylobacterota
TCC
Gly
>WENV183721738
PDWJ01083259
273229
Campylobacterota
TAC
Val
>WENV183721734
PDWJ01083259
273229
Campylobacterota
TAC
Val
>WENV183721138
PDWJ01056412
273229
Campylobacterota
TAC
Val
>WENV183719437
PDWJ01014112
96412
Campylobacterota
GTA
Tyr
>WENV183722305
PDWJ01118590
338447
Campylobacterota
TTC
Glu
>WENV183720282
PDWJ01030843
338447
Campylobacterota
TTC
Glu
>WENV183721025
PDWJ01052683
155329
Campylobacterota
GAT
Ile
>WENV183721737
PDWJ01083259
254398
Campylobacterota
TTT
Lys
>WENV183721732
PDWJ01083259
254398
Campylobacterota
TTT
Lys
>WENV183721030
PDWJ01052698
182562
Campylobacterota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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