This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
167 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1006336
SRR020488.51953
292138
Cyanobacteriota
CCA
Trp
>SRA1007441
SRR020488.452657
46946
Cyanobacteriota
TAA
Leu
>SRA1007410
SRR020488.438678
46946
Cyanobacteriota
TAA
Leu
>SRA1006638
SRR020488.161299
46946
Cyanobacteriota
TAA
Leu
>SRA1006594
SRR020488.146764
46946
Cyanobacteriota
TAA
Leu
>SRA1006413
SRR020488.79492
46946
Cyanobacteriota
TAA
Leu
>SRA1007179
SRR020488.363824
185187
Cyanobacteriota
CCG
Arg
>SRA1006410
SRR020488.77968
185187
Cyanobacteriota
CCG
Arg
>SRA1007292
SRR020488.400102
177109
Cyanobacteriota
CCT
Arg
>SRA1007202
SRR020488.373399
177109
Cyanobacteriota
CCT
Arg
>SRA1007079
SRR020488.325754
177109
Cyanobacteriota
CCT
Arg
>SRA1006929
SRR020488.269486
177109
Cyanobacteriota
CCT
Arg
>SRA1006739
SRR020488.192655
177109
Cyanobacteriota
CCT
Arg
>SRA1006652
SRR020488.167915
177109
Cyanobacteriota
CCT
Arg
>SRA1006608
SRR020488.150672
177109
Cyanobacteriota
CCT
Arg
>SRA1006585
SRR020488.142355
177109
Cyanobacteriota
CCT
Arg
>SRA1006538
SRR020488.126758
177109
Cyanobacteriota
CCT
Arg
>SRA1007429
SRR020488.447315
118720
Cyanobacteriota
CAA
Leu
>SRA1007411
SRR020488.438776
118720
Cyanobacteriota
CAA
Leu
>SRA1007402
SRR020488.436618
118720
Cyanobacteriota
CAA
Leu
>SRA1007205
SRR020488.373862
118720
Cyanobacteriota
CAA
Leu
>SRA1007146
SRR020488.353097
118720
Cyanobacteriota
CAA
Leu
>SRA1007035
SRR020488.305921
118720
Cyanobacteriota
CAA
Leu
>SRA1006866
SRR020488.240959
118720
Cyanobacteriota
CAA
Leu
>SRA1006844
SRR020488.228231
118720
Cyanobacteriota
CAA
Leu
>SRA1006682
SRR020488.175700
118720
Cyanobacteriota
CAA
Leu
>SRA1006317
SRR020488.44215
118720
Cyanobacteriota
CAA
Leu
>SRA1006280
SRR020488.28233
118720
Cyanobacteriota
CAA
Leu
>SRA1007403
SRR020488.437052
480623
Cyanobacteriota
TCC
Gly
>SRA1007367
SRR020488.422819
480623
Cyanobacteriota
TCC
Gly
>SRA1007300
SRR020488.404001
480623
Cyanobacteriota
TCC
Gly
>SRA1007145
SRR020488.352406
480623
Cyanobacteriota
TCC
Gly
>SRA1007129
SRR020488.345830
480623
Cyanobacteriota
TCC
Gly
>SRA1007106
SRR020488.336279
480623
Cyanobacteriota
TCC
Gly
>SRA1006994
SRR020488.290404
480623
Cyanobacteriota
TCC
Gly
>SRA1006891
SRR020488.254742
480623
Cyanobacteriota
TCC
Gly
>SRA1006856
SRR020488.237410
480623
Cyanobacteriota
TCC
Gly
>SRA1006820
SRR020488.219845
480623
Cyanobacteriota
TCC
Gly
>SRA1006712
SRR020488.185544
480623
Cyanobacteriota
TCC
Gly
>SRA1006709
SRR020488.185053
480623
Cyanobacteriota
TCC
Gly
>SRA1006572
SRR020488.136160
480623
Cyanobacteriota
TCC
Gly
>SRA1006377
SRR020488.67240
480623
Cyanobacteriota
TCC
Gly
>SRA1006310
SRR020488.39952
480623
Cyanobacteriota
TCC
Gly
>SRA1006296
SRR020488.34472
480623
Cyanobacteriota
TCC
Gly
>SRA1007091
SRR020488.330135
73534
Cyanobacteriota
CAG
Leu
>SRA1007338
SRR020488.415492
177220
Cyanobacteriota
CAT
Met
>SRA1007165
SRR020488.361521
177220
Cyanobacteriota
CAT
Met
>SRA1007153
SRR020488.356548
177220
Cyanobacteriota
CAT
Met
>SRA1006862
SRR020488.238976
177220
Cyanobacteriota
CAT
Met
>SRA1006785
SRR020488.208005
177220
Cyanobacteriota
CAT
Met
>SRA1006772
SRR020488.202921
177220
Cyanobacteriota
CAT
Met
>SRA1006468
SRR020488.98796
177220
Cyanobacteriota
CAT
Met
>SRA1006393
SRR020488.72569
177220
Cyanobacteriota
CAT
Met
>SRA1006344
SRR020488.53726
177220
Cyanobacteriota
CAT
Met
>SRA1006306
SRR020488.38771
177220
Cyanobacteriota
CAT
Met
>SRA1006302
SRR020488.35818
177220
Cyanobacteriota
CAT
Met
>SRA1006274
SRR020488.24564
177220
Cyanobacteriota
CAT
Met
>SRA1007456
SRR020488.459889
283431
Cyanobacteriota
GTG
His
>SRA1007391
SRR020488.431236
283431
Cyanobacteriota
GTG
His
>SRA1007167
SRR020488.361662
283431
Cyanobacteriota
GTG
His
>SRA1006705
SRR020488.183062
283431
Cyanobacteriota
GTG
His
>SRA1006690
SRR020488.178585
283431
Cyanobacteriota
GTG
His
>SRA1006654
SRR020488.168940
283431
Cyanobacteriota
GTG
His
>SRA1006614
SRR020488.152754
283431
Cyanobacteriota
GTG
His
>SRA1006559
SRR020488.132670
283431
Cyanobacteriota
GTG
His
>SRA1006521
SRR020488.120628
283431
Cyanobacteriota
GTG
His
>SRA1006509
SRR020488.113508
283431
Cyanobacteriota
GTG
His
>SRA1006418
SRR020488.80368
283431
Cyanobacteriota
GTG
His
>SRA1006294
SRR020488.33952
283431
Cyanobacteriota
GTG
His
>SRA1007445
SRR020488.454936
401929
Cyanobacteriota
TTG
Gln
>SRA1007371
SRR020488.424566
401929
Cyanobacteriota
TTG
Gln
>SRA1007320
SRR020488.409621
401929
Cyanobacteriota
TTG
Gln
>SRA1007262
SRR020488.391611
401929
Cyanobacteriota
TTG
Gln
>SRA1007253
SRR020488.389174
401929
Cyanobacteriota
TTG
Gln
>SRA1007170
SRR020488.362086
401929
Cyanobacteriota
TTG
Gln
>SRA1007002
SRR020488.294864
401929
Cyanobacteriota
TTG
Gln
>SRA1006967
SRR020488.281854
401929
Cyanobacteriota
TTG
Gln
>SRA1006951
SRR020488.277980
401929
Cyanobacteriota
TTG
Gln
>SRA1006919
SRR020488.263999
401929
Cyanobacteriota
TTG
Gln
>SRA1006881
SRR020488.247848
401929
Cyanobacteriota
TTG
Gln
>SRA1006744
SRR020488.193348
401929
Cyanobacteriota
TTG
Gln
>SRA1006722
SRR020488.188210
401929
Cyanobacteriota
TTG
Gln
>SRA1007184
SRR020488.366586
176188
Cyanobacteriota
CAT
Met
>SRA1006325
SRR020488.47372
176188
Cyanobacteriota
CAT
Met
>SRA1007423
SRR020488.443857
30082
Cyanobacteriota
TGA
Ser
>SRA1007121
SRR020488.341933
30082
Cyanobacteriota
TGA
Ser
>SRA1007101
SRR020488.334117
30082
Cyanobacteriota
TGA
Ser
>SRA1007073
SRR020488.322353
30082
Cyanobacteriota
TGA
Ser
>SRA1006817
SRR020488.219342
30082
Cyanobacteriota
TGA
Ser
>SRA1006445
SRR020488.90859
30082
Cyanobacteriota
TGA
Ser
>SRA1006979
SRR020488.285039
285848
Cyanobacteriota
CAT
Met
>SRA1006615
SRR020488.153055
285848
Cyanobacteriota
CAT
Met
>SRA1006405
SRR020488.77068
285848
Cyanobacteriota
CAT
Met
>SRA1007434
SRR020488.449034
118688
Cyanobacteriota
TAG
Leu
>SRA1007313
SRR020488.406793
118688
Cyanobacteriota
TAG
Leu
>SRA1007252
SRR020488.388405
118688
Cyanobacteriota
TAG
Leu
>SRA1007110
SRR020488.339129
118688
Cyanobacteriota
TAG
Leu
>SRA1006861
SRR020488.238755
118688
Cyanobacteriota
TAG
Leu
>SRA1006819
SRR020488.219617
118688
Cyanobacteriota
TAG
Leu
>SRA1006778
SRR020488.205653
118688
Cyanobacteriota
TAG
Leu
>SRA1006683
SRR020488.175988
118688
Cyanobacteriota
TAG
Leu
>SRA1006680
SRR020488.174553
118688
Cyanobacteriota
TAG
Leu
>SRA1006502
SRR020488.110681
118688
Cyanobacteriota
TAG
Leu
>SRA1006427
SRR020488.83985
118688
Cyanobacteriota
TAG
Leu
>SRA1007442
SRR020488.453947
400477
Cyanobacteriota
GTT
Asn
>SRA1007398
SRR020488.434653
400477
Cyanobacteriota
GTT
Asn
>SRA1007232
SRR020488.382743
400477
Cyanobacteriota
GTT
Asn
>SRA1007075
SRR020488.324117
400477
Cyanobacteriota
GTT
Asn
>SRA1007022
SRR020488.302135
400477
Cyanobacteriota
GTT
Asn
>SRA1006892
SRR020488.255120
400477
Cyanobacteriota
GTT
Asn
>SRA1006877
SRR020488.245827
400477
Cyanobacteriota
GTT
Asn
>SRA1006854
SRR020488.236567
400477
Cyanobacteriota
GTT
Asn
>SRA1006829
SRR020488.222320
400477
Cyanobacteriota
GTT
Asn
>SRA1006775
SRR020488.204707
400477
Cyanobacteriota
GTT
Asn
>SRA1006542
SRR020488.128064
400477
Cyanobacteriota
GTT
Asn
>SRA1006332
SRR020488.50302
400477
Cyanobacteriota
GTT
Asn
>SRA1006244
SRR020488.10975
400477
Cyanobacteriota
GTT
Asn
>SRA1007460
SRR020488.462641
177076
Cyanobacteriota
GTC
Asp
>SRA1007397
SRR020488.434276
177076
Cyanobacteriota
GTC
Asp
>SRA1007293
SRR020488.401060
177076
Cyanobacteriota
GTC
Asp
>SRA1006993
SRR020488.289911
177076
Cyanobacteriota
GTC
Asp
>SRA1006902
SRR020488.257296
177076
Cyanobacteriota
GTC
Asp
>SRA1006729
SRR020488.189468
177076
Cyanobacteriota
GTC
Asp
>SRA1006627
SRR020488.155970
177076
Cyanobacteriota
GTC
Asp
>SRA1006586
SRR020488.142692
177076
Cyanobacteriota
GTC
Asp
>SRA1006533
SRR020488.124482
177076
Cyanobacteriota
GTC
Asp
>SRA1006498
SRR020488.109826
177076
Cyanobacteriota
GTC
Asp
>SRA1006290
SRR020488.32721
177076
Cyanobacteriota
GTC
Asp
>SRA1007437
SRR020488.451366
195553
Cyanobacteriota
GGG
Pro
>SRA1007383
SRR020488.428364
195553
Cyanobacteriota
GGG
Pro
>SRA1007287
SRR020488.399020
195553
Cyanobacteriota
GGG
Pro
>SRA1007274
SRR020488.395646
195553
Cyanobacteriota
GGG
Pro
>SRA1007245
SRR020488.385859
195553
Cyanobacteriota
GGG
Pro
>SRA1007074
SRR020488.322605
195553
Cyanobacteriota
GGG
Pro
>SRA1007024
SRR020488.302560
195553
Cyanobacteriota
GGG
Pro
>SRA1006448
SRR020488.92688
282452
Cyanobacteriota
GGC
Ala
>SRA1006273
SRR020488.24296
282452
Cyanobacteriota
GGC
Ala
>SRA1007444
SRR020488.454701
401934
Cyanobacteriota
GGT
Thr
>SRA1007381
SRR020488.428312
401934
Cyanobacteriota
GGT
Thr
>SRA1007366
SRR020488.422719
401934
Cyanobacteriota
GGT
Thr
>SRA1007341
SRR020488.416724
401934
Cyanobacteriota
GGT
Thr
>SRA1007221
SRR020488.379637
401934
Cyanobacteriota
GGT
Thr
>SRA1007130
SRR020488.345951
401934
Cyanobacteriota
GGT
Thr
>SRA1007039
SRR020488.307905
401934
Cyanobacteriota
GGT
Thr
>SRA1006711
SRR020488.185129
401934
Cyanobacteriota
GGT
Thr
>SRA1006402
SRR020488.75524
401934
Cyanobacteriota
GGT
Thr
>SRA1006241
SRR020488.9305
401934
Cyanobacteriota
GGT
Thr
>SRA1006232
SRR020488.5766
401934
Cyanobacteriota
GGT
Thr
>SRA1007314
SRR020488.406890
289209
Cyanobacteriota
TGC
Ala
>SRA1007178
SRR020488.363432
289209
Cyanobacteriota
TGC
Ala
>SRA1007029
SRR020488.303434
289209
Cyanobacteriota
TGC
Ala
>SRA1006792
SRR020488.210476
289209
Cyanobacteriota
TGC
Ala
>SRA1006789
SRR020488.209879
289209
Cyanobacteriota
TGC
Ala
>SRA1006565
SRR020488.134034
289209
Cyanobacteriota
TGC
Ala
>SRA1006308
SRR020488.39360
289209
Cyanobacteriota
TGC
Ala
>SRA1006247
SRR020488.12307
289209
Cyanobacteriota
TGC
Ala
>SRA1007334
SRR020488.414094
180925
Cyanobacteriota
ACG
Arg
>SRA1007197
SRR020488.372684
180925
Cyanobacteriota
ACG
Arg
>SRA1007168
SRR020488.361870
180925
Cyanobacteriota
ACG
Arg
>SRA1007140
SRR020488.349436
180925
Cyanobacteriota
ACG
Arg
>SRA1007053
SRR020488.310451
180925
Cyanobacteriota
ACG
Arg
>SRA1007023
SRR020488.302254
180925
Cyanobacteriota
ACG
Arg
>SRA1006940
SRR020488.272561
180925
Cyanobacteriota
ACG
Arg
>SRA1006581
SRR020488.140972
180925
Cyanobacteriota
ACG
Arg
>SRA1006543
SRR020488.128072
180925
Cyanobacteriota
ACG
Arg
>SRA1006499
SRR020488.110198
180925
Cyanobacteriota
ACG
Arg
>SRA1006480
SRR020488.102910
180925
Cyanobacteriota
ACG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK