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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181579704
OGJZ01000702
4169
Fusobacteriota
>WENV181579570
OGJZ01000278
189323
Fusobacteriota
ACG
Arg
>WENV181580258
OGJZ01017740
75917
Fusobacteriota
CAA
Leu
>WENV181579875
OGJZ01001788
101713
Fusobacteriota
CAG
Leu
>WENV181579940
OGJZ01002469
184470
Fusobacteriota
CAT
Met
>WENV181580096
OGJZ01005037
175943
Fusobacteriota
CAT
Met
>WENV181580161
OGJZ01007984
222433
Fusobacteriota
CCT
Arg
>WENV181580081
OGJZ01004547
75916
Fusobacteriota
GAG
Leu
>WENV181580128
OGJZ01007096
484173
Fusobacteriota
GCA
Cys
>WENV181579569
OGJZ01000278
21367
Fusobacteriota
GCT
Ser
>WENV181580137
OGJZ01007229
288877
Fusobacteriota
GTT
Asn
>WENV181580346
OGJZ01043120
288877
Fusobacteriota
GTT
Asn
>WENV181579939
OGJZ01002469
57899
Fusobacteriota
TAA
Leu
>WENV181579720
OGJZ01000763
288879
Fusobacteriota
TAC
Val
>WENV181580019
OGJZ01003383
175913
Fusobacteriota
TCG
Arg
>WENV181579568
OGJZ01000278
141501
Fusobacteriota
TGA
Ser
>WENV181580126
OGJZ01007096
141747
Fusobacteriota
TGA
Ser
>WENV181580174
OGJZ01008784
295214
Fusobacteriota
TGC
Ala
>WENV181580335
OGJZ01037589
203913
Fusobacteriota
TGG
Pro
>WENV181579526
OGJZ01000197
184469
Fusobacteriota
TGG
Pro
>WENV181580129
OGJZ01007096
288878
Fusobacteriota
TGT
Thr
>WENV181579948
OGJZ01002554
407549
Fusobacteriota
TTC
Glu
>WENV181579600
OGJZ01000351
407547
Fusobacteriota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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