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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV11100473
AERA01012825
422716
Gammaproteobacteria
TTG
Gln
>WENV170000115
AERA01012825
422716
Gammaproteobacteria
TTG
Gln
>WENV11100529
AERA01019299
31324
Gammaproteobacteria
GGA
Ser
>WENV170000171
AERA01019299
31324
Gammaproteobacteria
GGA
Ser
>WENV11100582
AERA01027801
280882
Gammaproteobacteria
GTG
His
>WENV170000224
AERA01027801
280882
Gammaproteobacteria
GTG
His
>WENV11100414
AERA01003652
9062
Gammaproteobacteria
GCT
Ser
>WENV170000056
AERA01003652
9062
Gammaproteobacteria
GCT
Ser
>WENV11100590
AERA01030868
176242
Gammaproteobacteria
CCG
Arg
>WENV170000232
AERA01030868
176242
Gammaproteobacteria
CCG
Arg
>WENV11100423
AERA01004508
280876
Gammaproteobacteria
GGT
Thr
>WENV170000065
AERA01004508
280876
Gammaproteobacteria
GGT
Thr
>WENV11100421
AERA01004508
117821
Gammaproteobacteria
GTA
Tyr
>WENV170000063
AERA01004508
117821
Gammaproteobacteria
GTA
Tyr
>WENV11100548
AERA01021885
118414
Gammaproteobacteria
TAG
Leu
>WENV170000190
AERA01021885
118414
Gammaproteobacteria
TAG
Leu
>WENV11100409
AERA01003563
293662
Gammaproteobacteria
GGT
Thr
>WENV170000051
AERA01003563
293662
Gammaproteobacteria
GGT
Thr
>WENV11100560
AERA01024097
315947
Gammaproteobacteria
CGC
Ala
>WENV170000202
AERA01024097
315947
Gammaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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