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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183728778
PJTQ01000427
23711
Gammaproteobacteria
GGA
Ser
>WENV183729149
PJTQ01007031
23711
Gammaproteobacteria
GGA
Ser
>WENV183728909
PJTQ01001096
339731
Gammaproteobacteria
CTG
Gln
>WENV183728569
PJTQ01000143
51143
Gammaproteobacteria
TGA
Ser
>WENV183729137
PJTQ01006285
411594
Gammaproteobacteria
TCC
Gly
>WENV183728417
PJTQ01000046
16446
Gammaproteobacteria
GCT
Ser
>WENV183728642
PJTQ01000222
279806
Gammaproteobacteria
TGT
Thr
>WENV183729317
PJTQ01021512
279806
Gammaproteobacteria
TGT
Thr
>WENV183729005
PJTQ01002163
298259
Gammaproteobacteria
GAA
Phe
>WENV183728876
PJTQ01000839
52727
Gammaproteobacteria
GGA
Ser
>WENV183729544
PJTQ01064129
238307
Gammaproteobacteria
GAA
Phe
>WENV183728641
PJTQ01000222
238307
Gammaproteobacteria
GAA
Phe
>WENV183729341
PJTQ01024886
96066
Gammaproteobacteria
TAA
Leu
>WENV183728541
PJTQ01000120
96066
Gammaproteobacteria
TAA
Leu
>WENV183729627
PJTQ01094577
279906
Gammaproteobacteria
TGC
Ala
>WENV183728692
PJTQ01000289
161470
Gammaproteobacteria
TCT
Arg
>WENV183728649
PJTQ01000235
68265
Gammaproteobacteria
GAG
Leu
>WENV183728883
PJTQ01000965
277276
Gammaproteobacteria
CTC
Glu
>WENV183728886
PJTQ01001029
173286
Gammaproteobacteria
GGG
Pro
>WENV183728800
PJTQ01000454
428943
Gammaproteobacteria
>WENV183728421
PJTQ01000046
165964
Gammaproteobacteria
ACG
Arg
>WENV183728420
PJTQ01000046
165964
Gammaproteobacteria
ACG
Arg
>WENV183728419
PJTQ01000046
165964
Gammaproteobacteria
ACG
Arg
>WENV183728418
PJTQ01000046
165964
Gammaproteobacteria
ACG
Arg
>WENV183728422
PJTQ01000046
147595
Gammaproteobacteria
CCT
Arg
>WENV183728846
PJTQ01000683
16238
Gammaproteobacteria
CGA
Ser
>WENV183729574
PJTQ01074403
241212
Gammaproteobacteria
GTG
His
>WENV183729041
PJTQ01003079
99239
Gammaproteobacteria
GAG
Leu
>WENV183729475
PJTQ01046325
145334
Gammaproteobacteria
CCG
Arg
>WENV183728597
PJTQ01000168
145334
Gammaproteobacteria
CCG
Arg
>WENV183729575
PJTQ01074403
96065
Gammaproteobacteria
TAG
Leu
>WENV183728348
PJTQ01000023
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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