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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV080101
AATO01004917
285981
Bacteroidota
GAT
Ile
>WENV080129
AATO01007873
458736
Bacteroidota
GCC
Gly
>WENV080186
AATO01011352
457188
Bacteroidota
GCC
Gly
>WENV080221
AATO01013629
454691
Bacteroidota
GCC
Gly
>WENV080191
AATO01011644
456547
Bacteroidota
GCC
Gly
>WENV080215
AATO01013299
275278
Bacteroidota
GTC
Asp
>WENV080216
AATO01013299
275278
Bacteroidota
GTC
Asp
>WENV080190
AATO01011644
115574
Bacteroidota
TAA
Leu
>WENV080117
AATO01006382
281769
Bacteroidota
TCG
Arg
>WENV080152
AATO01009308
273596
Bacteroidota
TCT
Arg
>WENV080171
AATO01010939
87190
Bacteroidota
TGA
Ser
>WENV080151
AATO01009308
241814
Bacteroidota
TGG
Pro
>WENV080040
AATO01001869
277303
Bacteroidota
TGT
Thr
>WENV080167
AATO01010711
456154
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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