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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV083109
BAAX01002581
270507
Bacillota
GTC
Asp
>WENV083527
BAAX01032220
279369
Bacillota
CAT
Met
>WENV083207
BAAX01006298
451336
Bacillota
GAA
Phe
>WENV083346
BAAX01015668
451336
Bacillota
GAA
Phe
>WENV083369
BAAX01016542
451336
Bacillota
GAA
Phe
>WENV083460
BAAX01025185
451336
Bacillota
GAA
Phe
>WENV083264
BAAX01009837
275710
Bacillota
CCG
Arg
>WENV083541
BAAX01035151
275710
Bacillota
CCG
Arg
>WENV083524
BAAX01031531
455828
Bacillota
TAC
Val
>WENV083018
BAAX01000383
782131
Bacillota
GCA
Cys
>WENV083421
BAAX01022175
653346
Bacillota
TTC
Glu
>WENV083167
BAAX01005012
653346
Bacillota
TTC
Glu
>WENV083091
BAAX01002192
653346
Bacillota
TTC
Glu
>WENV083275
BAAX01010820
464223
Bacillota
TTT
Lys
>WENV083131
BAAX01003138
86860
Bacillota
TGA
Ser
>WENV083118
BAAX01002783
86860
Bacillota
TGA
Ser
>WENV083130
BAAX01003138
8223
Bacillota
GCT
Ser
>WENV083278
BAAX01010820
660007
Bacillota
GCC
Gly
>WENV083152
BAAX01003830
282520
Bacillota
TCT
Arg
>WENV083473
BAAX01027113
779387
Bacillota
TTG
Gln
>WENV083323
BAAX01014130
284731
Bacillota
GTC
Asp
>WENV083201
BAAX01006226
466790
Bacillota
CGG
Pro
>WENV083250
BAAX01008340
780499
Bacillota
GCA
Cys
>WENV083085
BAAX01001881
282349
Bacillota
GTC
Asp
>WENV083017
BAAX01000383
659685
Bacillota
GCC
Gly
>WENV083458
BAAX01025185
451377
Bacillota
TAC
Val
>WENV083433
BAAX01023296
451377
Bacillota
TAC
Val
>WENV083371
BAAX01016542
451377
Bacillota
TAC
Val
>WENV083209
BAAX01006298
451377
Bacillota
TAC
Val
>WENV083344
BAAX01015668
451377
Bacillota
TAC
Val
>WENV083164
BAAX01004600
279224
Bacillota
GAT
Ile
>WENV083347
BAAX01015784
653367
Bacillota
CTC
Glu
>WENV083148
BAAX01003760
282469
Bacillota
GAC
Val
>WENV083016
BAAX01000362
782328
Bacillota
CCC
Gly
>WENV083277
BAAX01010820
463246
Bacillota
GTT
Asn
>WENV083078
BAAX01001651
463246
Bacillota
GTT
Asn
>WENV083070
BAAX01001334
73368
Bacillota
TGA
Ser
>WENV083105
BAAX01002561
270438
Bacillota
TCT
Arg
>WENV083425
BAAX01022454
451352
Bacillota
GGT
Thr
>WENV083225
BAAX01007813
451352
Bacillota
GGT
Thr
>WENV083174
BAAX01005487
451352
Bacillota
GGT
Thr
>WENV083132
BAAX01003305
451352
Bacillota
GGT
Thr
>WENV083265
BAAX01009901
112239
Bacillota
CAG
Leu
>WENV083103
BAAX01002561
112239
Bacillota
CAG
Leu
>WENV083191
BAAX01005889
282468
Bacillota
CGG
Pro
>WENV083416
BAAX01021879
451398
Bacillota
TGC
Ala
>WENV083108
BAAX01002579
451398
Bacillota
TGC
Ala
>WENV083298
BAAX01012334
153689
Bacillota
GTA
Tyr
>WENV083120
BAAX01002873
153689
Bacillota
GTA
Tyr
>WENV083516
BAAX01030544
653349
Bacillota
GCC
Gly
>WENV083378
BAAX01016859
86865
Bacillota
AAG
Leu
>WENV083274
BAAX01010820
463801
Bacillota
TTC
Glu
>WENV083077
BAAX01001651
463801
Bacillota
TTC
Glu
>WENV083178
BAAX01005544
463803
Bacillota
CCA
Trp
>WENV083459
BAAX01025185
284668
Bacillota
GTC
Asp
>WENV083208
BAAX01006298
284668
Bacillota
GTC
Asp
>WENV083133
BAAX01003305
284668
Bacillota
GTC
Asp
>WENV083106
BAAX01002563
274593
Bacillota
GAT
Ile
>WENV083261
BAAX01009694
155259
Bacillota
CAG
Leu
>WENV083513
BAAX01030330
31194
Bacillota
GCT
Ser
>WENV083272
BAAX01010602
466782
Bacillota
CCC
Gly
>WENV083313
BAAX01013803
179909
Bacillota
GTA
Tyr
>WENV083325
BAAX01014130
661891
Bacillota
GCC
Gly
>WENV083273
BAAX01010820
461007
Bacillota
TAC
Val
>WENV083099
BAAX01002436
659703
Bacillota
TTG
Gln
>WENV083258
BAAX01009142
779385
Bacillota
CTG
Gln
>WENV083200
BAAX01006226
779385
Bacillota
CTG
Gln
>WENV083476
BAAX01027515
451357
Bacillota
CTT
Lys
>WENV083181
BAAX01005616
451357
Bacillota
CTT
Lys
>WENV082994
BAAX01000042
451357
Bacillota
CTT
Lys
>WENV082992
BAAX01000032
451357
Bacillota
CTT
Lys
>WENV083092
BAAX01002192
270546
Bacillota
CAT
Met
>WENV083168
BAAX01005012
270546
Bacillota
CAT
Met
>WENV083420
BAAX01022175
270546
Bacillota
CAT
Met
>WENV083071
BAAX01001338
281604
Bacillota
GGG
Pro
>WENV083081
BAAX01001769
460809
Bacillota
CTT
Lys
>WENV082987
BAAX01000029
460809
Bacillota
CTT
Lys
>WENV083082
BAAX01001769
460809
Bacillota
CTT
Lys
>WENV083407
BAAX01020708
451384
Bacillota
TGG
Pro
>WENV083388
BAAX01017572
467075
Bacillota
TGC
Ala
>WENV083043
BAAX01000672
466773
Bacillota
GGC
Ala
>WENV083123
BAAX01002910
282466
Bacillota
ACG
Arg
>WENV083000
BAAX01000062
463254
Bacillota
CTT
Lys
>WENV083477
BAAX01027515
653369
Bacillota
CTC
Glu
>WENV082993
BAAX01000032
653369
Bacillota
CTC
Glu
>WENV083430
BAAX01023277
270399
Bacillota
GAT
Ile
>WENV083056
BAAX01000905
270399
Bacillota
GAT
Ile
>WENV083004
BAAX01000131
270399
Bacillota
GAT
Ile
>WENV083461
BAAX01025185
451376
Bacillota
GCC
Gly
>WENV083457
BAAX01025185
451376
Bacillota
GCC
Gly
>WENV083432
BAAX01023296
451376
Bacillota
GCC
Gly
>WENV083372
BAAX01016542
451376
Bacillota
GCC
Gly
>WENV083206
BAAX01006298
451376
Bacillota
GCC
Gly
>WENV083210
BAAX01006298
451376
Bacillota
GCC
Gly
>WENV083343
BAAX01015668
451376
Bacillota
GCC
Gly
>WENV083368
BAAX01016542
451376
Bacillota
GCC
Gly
>WENV083431
BAAX01023277
451344
Bacillota
TGC
Ala
>WENV083055
BAAX01000905
451344
Bacillota
TGC
Ala
>WENV083003
BAAX01000131
451344
Bacillota
TGC
Ala
>WENV083107
BAAX01002563
461022
Bacillota
TGC
Ala
>WENV083005
BAAX01000170
461022
Bacillota
TGC
Ala
>WENV083297
BAAX01012334
653347
Bacillota
TGT
Thr
>WENV083279
BAAX01010827
653347
Bacillota
TGT
Thr
>WENV083117
BAAX01002779
653347
Bacillota
TGT
Thr
>WENV083288
BAAX01011531
270405
Bacillota
ACG
Arg
>WENV083101
BAAX01002539
270405
Bacillota
ACG
Arg
>WENV083031
BAAX01000492
270405
Bacillota
ACG
Arg
>WENV083405
BAAX01020306
284784
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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