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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170025099
BCQL01210849
218119
Alphaproteobacteria
>WENV170024443
BCQL01061844
218119
Alphaproteobacteria
>WENV170024120
BCQL01021614
218119
Alphaproteobacteria
>WENV170024536
BCQL01071995
655166
Alphaproteobacteria
CAC
Val
>WENV170024387
BCQL01051925
154064
Alphaproteobacteria
CAG
Leu
>WENV170023847
BCQL01005601
274131
Alphaproteobacteria
CAT
Met
>WENV170023994
BCQL01014011
274131
Alphaproteobacteria
CAT
Met
>WENV170024618
BCQL01085602
274131
Alphaproteobacteria
CAT
Met
>WENV170024559
BCQL01075042
275989
Alphaproteobacteria
CAT
Met
>WENV170023822
BCQL01005084
274223
Alphaproteobacteria
CCG
Arg
>WENV170023631
BCQL01000356
47685
Alphaproteobacteria
CGA
Ser
>WENV170023866
BCQL01006965
47685
Alphaproteobacteria
CGA
Ser
>WENV170024309
BCQL01041730
47685
Alphaproteobacteria
CGA
Ser
>WENV170024007
BCQL01015235
661003
Alphaproteobacteria
GAA
Phe
>WENV170025202
BCQL01250514
661003
Alphaproteobacteria
GAA
Phe
>WENV170024566
BCQL01076140
654103
Alphaproteobacteria
GAA
Phe
>WENV170024800
BCQL01130509
654103
Alphaproteobacteria
GAA
Phe
>WENV170024904
BCQL01155708
654103
Alphaproteobacteria
GAA
Phe
>WENV170024397
BCQL01053706
655359
Alphaproteobacteria
GAC
Val
>WENV170024105
BCQL01020126
154065
Alphaproteobacteria
GAG
Leu
>WENV170024227
BCQL01031276
780327
Alphaproteobacteria
GCA
Cys
>WENV170023898
BCQL01009148
653534
Alphaproteobacteria
GCC
Gly
>WENV170023792
BCQL01003764
656001
Alphaproteobacteria
GCC
Gly
>WENV170024374
BCQL01049266
655361
Alphaproteobacteria
GCC
Gly
>WENV170023815
BCQL01004992
45799
Alphaproteobacteria
GCT
Ser
>WENV170024101
BCQL01019988
45799
Alphaproteobacteria
GCT
Ser
>WENV170025066
BCQL01199986
46222
Alphaproteobacteria
GGA
Ser
>WENV170025019
BCQL01184164
46222
Alphaproteobacteria
GGA
Ser
>WENV170024422
BCQL01058033
46222
Alphaproteobacteria
GGA
Ser
>WENV170023750
BCQL01002336
46222
Alphaproteobacteria
GGA
Ser
>WENV170023800
BCQL01003960
454912
Alphaproteobacteria
GGC
Ala
>WENV170023976
BCQL01012849
454912
Alphaproteobacteria
GGC
Ala
>WENV170024859
BCQL01142917
454912
Alphaproteobacteria
GGC
Ala
>WENV170024933
BCQL01164409
454912
Alphaproteobacteria
GGC
Ala
>WENV170025188
BCQL01246642
454912
Alphaproteobacteria
GGC
Ala
>WENV170023802
BCQL01004130
273797
Alphaproteobacteria
GGG
Pro
>WENV170024066
BCQL01017817
273797
Alphaproteobacteria
GGG
Pro
>WENV170024532
BCQL01071453
273797
Alphaproteobacteria
GGG
Pro
>WENV170024682
BCQL01097257
273797
Alphaproteobacteria
GGG
Pro
>WENV170025026
BCQL01186292
273797
Alphaproteobacteria
GGG
Pro
>WENV170025341
BCQL01289940
273797
Alphaproteobacteria
GGG
Pro
>WENV170023633
BCQL01000387
275828
Alphaproteobacteria
GTC
Asp
>WENV170023634
BCQL01000387
275828
Alphaproteobacteria
GTC
Asp
>WENV170024047
BCQL01017012
275828
Alphaproteobacteria
GTC
Asp
>WENV170024096
BCQL01019554
275828
Alphaproteobacteria
GTC
Asp
>WENV170025116
BCQL01221218
275828
Alphaproteobacteria
GTC
Asp
>WENV170025377
BCQL01305856
275828
Alphaproteobacteria
GTC
Asp
>WENV170024308
BCQL01041497
270796
Alphaproteobacteria
GTC
Asp
>WENV170023899
BCQL01009149
274127
Alphaproteobacteria
GTG
His
>WENV170024786
BCQL01127289
655394
Alphaproteobacteria
GTT
Asn
>WENV170024505
BCQL01069557
655394
Alphaproteobacteria
GTT
Asn
>WENV170024317
BCQL01042156
655394
Alphaproteobacteria
GTT
Asn
>WENV170023575
BCQL01000016
655394
Alphaproteobacteria
GTT
Asn
>WENV170024425
BCQL01059329
452917
Alphaproteobacteria
TAC
Val
>WENV170024702
BCQL01102207
452917
Alphaproteobacteria
TAC
Val
>WENV170024773
BCQL01122546
452917
Alphaproteobacteria
TAC
Val
>WENV170025285
BCQL01278392
452917
Alphaproteobacteria
TAC
Val
>WENV170024980
BCQL01175236
180749
Alphaproteobacteria
TAG
Leu
>WENV170023998
BCQL01014136
180720
Alphaproteobacteria
TAG
Leu
>WENV170024411
BCQL01056421
788550
Alphaproteobacteria
TCC
Gly
>WENV170024131
BCQL01022705
782365
Alphaproteobacteria
TCC
Gly
>WENV170023712
BCQL01001572
241030
Alphaproteobacteria
TCT
Arg
>WENV170024360
BCQL01047222
452895
Alphaproteobacteria
TGC
Ala
>WENV170023587
BCQL01000106
275667
Alphaproteobacteria
TGG
Pro
>WENV170024781
BCQL01125423
275667
Alphaproteobacteria
TGG
Pro
>WENV170024599
BCQL01082445
291540
Alphaproteobacteria
TGG
Pro
>WENV170023921
BCQL01009773
275157
Alphaproteobacteria
TGG
Pro
>WENV170023880
BCQL01007506
274132
Alphaproteobacteria
TGG
Pro
>WENV170024686
BCQL01098535
655167
Alphaproteobacteria
TTC
Glu
>WENV170024798
BCQL01130254
655167
Alphaproteobacteria
TTC
Glu
>WENV170023896
BCQL01008861
655358
Alphaproteobacteria
TTG
Gln
>WENV170024761
BCQL01119358
655358
Alphaproteobacteria
TTG
Gln
>WENV170024908
BCQL01158136
454914
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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