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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170191879
CEPD01073278
218595
Alphaproteobacteria
CAA
Leu
>WENV170192034
CEPD01119723
457159
Alphaproteobacteria
CGC
Ala
>WENV170191494
CEPD01026811
664335
Alphaproteobacteria
TTC
Glu
>WENV170191894
CEPD01074862
455289
Alphaproteobacteria
TTT
Lys
>WENV170191645
CEPD01043799
780331
Alphaproteobacteria
TCC
Gly
>WENV170191874
CEPD01072816
47093
Alphaproteobacteria
CGA
Ser
>WENV170191929
CEPD01087743
457364
Alphaproteobacteria
TGT
Thr
>WENV170191273
CEPD01004529
451755
Alphaproteobacteria
TGC
Ala
>WENV170191399
CEPD01015075
19999
Alphaproteobacteria
GCT
Ser
>WENV170191695
CEPD01049653
274144
Alphaproteobacteria
GTG
His
>WENV170191766
CEPD01058812
455172
Alphaproteobacteria
GGC
Ala
>WENV170191336
CEPD01009897
273450
Alphaproteobacteria
TCT
Arg
>WENV170192125
CEPD01141640
274138
Alphaproteobacteria
CAT
Met
>WENV170191915
CEPD01083839
113188
Alphaproteobacteria
GAG
Leu
>WENV170191709
CEPD01053290
113204
Alphaproteobacteria
GAG
Leu
>WENV170191619
CEPD01041172
45701
Alphaproteobacteria
CGA
Ser
>WENV170191621
CEPD01041301
112742
Alphaproteobacteria
GAG
Leu
>WENV170192104
CEPD01138188
454512
Alphaproteobacteria
CCA
Trp
>WENV170191916
CEPD01084069
655271
Alphaproteobacteria
GGT
Thr
>WENV170191926
CEPD01087323
451756
Alphaproteobacteria
CCA
Trp
>WENV170191650
CEPD01044458
780346
Alphaproteobacteria
CTG
Gln
>WENV170191397
CEPD01015045
454504
Alphaproteobacteria
CAT
Met
>WENV170191794
CEPD01063370
31090
Alphaproteobacteria
GGA
Ser
>WENV170192102
CEPD01137870
780039
Alphaproteobacteria
GCA
Cys
>WENV170191620
CEPD01041233
275927
Alphaproteobacteria
CCG
Arg
>WENV170191956
CEPD01098553
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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