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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170277738
CERQ01018599
218595
Alphaproteobacteria
CAA
Leu
>WENV170277673
CERQ01011852
457159
Alphaproteobacteria
CGC
Ala
>WENV170278514
CERQ01105372
452565
Alphaproteobacteria
GAA
Phe
>WENV170278754
CERQ01125139
788550
Alphaproteobacteria
TCC
Gly
>WENV170277981
CERQ01042249
452629
Alphaproteobacteria
GAA
Phe
>WENV170278758
CERQ01125350
456473
Alphaproteobacteria
GGC
Ala
>WENV170278766
CERQ01125758
780260
Alphaproteobacteria
GCA
Cys
>WENV170278187
CERQ01062769
273155
Alphaproteobacteria
GTG
His
>WENV170278591
CERQ01114213
19988
Alphaproteobacteria
GCT
Ser
>WENV170278017
CERQ01045625
454180
Alphaproteobacteria
CGT
Thr
>WENV170278451
CERQ01095658
273447
Alphaproteobacteria
CCT
Arg
>WENV170278050
CERQ01048634
454623
Alphaproteobacteria
TAC
Val
>WENV170278793
CERQ01126445
47093
Alphaproteobacteria
CGA
Ser
>WENV170277965
CERQ01041161
457364
Alphaproteobacteria
TGT
Thr
>WENV170278110
CERQ01054638
451755
Alphaproteobacteria
TGC
Ala
>WENV170278925
CERQ01182549
655849
Alphaproteobacteria
TTG
Gln
>WENV170278778
CERQ01126379
274224
Alphaproteobacteria
CAT
Met
>WENV170279035
CERQ01222223
153953
Alphaproteobacteria
TAA
Leu
>WENV170278698
CERQ01121139
653532
Alphaproteobacteria
GTT
Asn
>WENV170277653
CERQ01009408
19999
Alphaproteobacteria
GCT
Ser
>WENV170277588
CERQ01003787
180320
Alphaproteobacteria
TAG
Leu
>WENV170278884
CERQ01168712
273450
Alphaproteobacteria
TCT
Arg
>WENV170278501
CERQ01103252
454059
Alphaproteobacteria
TTT
Lys
>WENV170278350
CERQ01082485
273908
Alphaproteobacteria
CCG
Arg
>WENV170277761
CERQ01020472
113204
Alphaproteobacteria
GAG
Leu
>WENV170277942
CERQ01039460
45928
Alphaproteobacteria
TGA
Ser
>WENV170278753
CERQ01125139
112742
Alphaproteobacteria
GAG
Leu
>WENV170278546
CERQ01109296
454512
Alphaproteobacteria
CCA
Trp
>WENV170278777
CERQ01126306
454512
Alphaproteobacteria
CCA
Trp
>WENV170277821
CERQ01027005
454056
Alphaproteobacteria
CGT
Thr
>WENV170277830
CERQ01028178
455360
Alphaproteobacteria
CGC
Ala
>WENV170277719
CERQ01016516
275204
Alphaproteobacteria
ACG
Arg
>WENV170278386
CERQ01086924
655361
Alphaproteobacteria
GCC
Gly
>WENV170278008
CERQ01045104
655271
Alphaproteobacteria
GGT
Thr
>WENV170278485
CERQ01100078
451756
Alphaproteobacteria
CCA
Trp
>WENV170277881
CERQ01032865
780346
Alphaproteobacteria
CTG
Gln
>WENV170277783
CERQ01022781
454504
Alphaproteobacteria
CAT
Met
>WENV170278487
CERQ01100502
452755
Alphaproteobacteria
TAC
Val
>WENV170278090
CERQ01052181
270798
Alphaproteobacteria
CGG
Pro
>WENV170278995
CERQ01208796
281027
Alphaproteobacteria
CCT
Arg
>WENV170278592
CERQ01114238
31090
Alphaproteobacteria
GGA
Ser
>WENV170278721
CERQ01123008
112839
Alphaproteobacteria
CAG
Leu
>WENV170279019
CERQ01216748
654915
Alphaproteobacteria
GCC
Gly
>WENV170277968
CERQ01041501
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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