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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170336273
CETA01000703
466186
Gammaproteobacteria
TGC
Ala
>WENV170336274
CETA01000806
46215
Gammaproteobacteria
GCT
Ser
>WENV170336293
CETA01002479
452404
Gammaproteobacteria
TGT
Thr
>WENV170336294
CETA01002479
218035
Gammaproteobacteria
GTA
Tyr
>WENV170336295
CETA01002479
653834
Gammaproteobacteria
TCC
Gly
>WENV170336296
CETA01002479
452405
Gammaproteobacteria
GGT
Thr
>WENV170336297
CETA01002560
273856
Gammaproteobacteria
GAC
Val
>WENV170336306
CETA01003936
463262
Gammaproteobacteria
TTT
Lys
>WENV170336331
CETA01004677
456267
Gammaproteobacteria
GAA
Phe
>WENV170336352
CETA01005360
780764
Gammaproteobacteria
TCC
Gly
>WENV170336388
CETA01007341
273847
Gammaproteobacteria
CCT
Arg
>WENV170336394
CETA01007890
274775
Gammaproteobacteria
GAC
Val
>WENV170336442
CETA01011873
273749
Gammaproteobacteria
CCA
Trp
>WENV170336455
CETA01012516
271253
Gammaproteobacteria
CAT
Met
>WENV170336457
CETA01012516
271253
Gammaproteobacteria
CAT
Met
>WENV170336464
CETA01012877
276971
Gammaproteobacteria
ACG
Arg
>WENV170336465
CETA01012877
276971
Gammaproteobacteria
ACG
Arg
>WENV170336472
CETA01013295
479074
Gammaproteobacteria
GCC
Gly
>WENV170336473
CETA01013295
782287
Gammaproteobacteria
GCA
Cys
>WENV170336523
CETA01017181
452412
Gammaproteobacteria
GCC
Gly
>WENV170336592
CETA01023020
656944
Gammaproteobacteria
CCT
Arg
>WENV170336654
CETA01028498
270982
Gammaproteobacteria
GAT
Ile
>WENV170336655
CETA01028498
467082
Gammaproteobacteria
TGC
Ala
>WENV170336656
CETA01028547
275006
Gammaproteobacteria
GGG
Pro
>WENV170336725
CETA01033085
112884
Gammaproteobacteria
CAG
Leu
>WENV170336754
CETA01035558
273870
Gammaproteobacteria
ACG
Arg
>WENV170336778
CETA01038094
464809
Gammaproteobacteria
GAA
Phe
>WENV170336816
CETA01042042
459789
Gammaproteobacteria
GTT
Asn
>WENV170336817
CETA01042042
459789
Gammaproteobacteria
GTT
Asn
>WENV170336818
CETA01042042
459789
Gammaproteobacteria
GTT
Asn
>WENV170336833
CETA01043115
270982
Gammaproteobacteria
GAT
Ile
>WENV170336893
CETA01047955
270982
Gammaproteobacteria
GAT
Ile
>WENV170336907
CETA01048958
271253
Gammaproteobacteria
CAT
Met
>WENV170336915
CETA01050599
275658
Gammaproteobacteria
TGG
Pro
>WENV170337038
CETA01060778
273863
Gammaproteobacteria
GGG
Pro
>WENV170337043
CETA01060980
451784
Gammaproteobacteria
GAA
Phe
>WENV170337047
CETA01061385
276974
Gammaproteobacteria
GGG
Pro
>WENV170337069
CETA01064857
276973
Gammaproteobacteria
GAC
Val
>WENV170337127
CETA01073212
459731
Gammaproteobacteria
GGT
Thr
>WENV170337133
CETA01074086
452414
Gammaproteobacteria
TTC
Glu
>WENV170337137
CETA01074906
276372
Gammaproteobacteria
ACG
Arg
>WENV170337261
CETA01092165
452377
Gammaproteobacteria
GTT
Asn
>WENV170337288
CETA01094629
452412
Gammaproteobacteria
GCC
Gly
>WENV170337304
CETA01097408
113235
Gammaproteobacteria
GAG
Leu
>WENV170337305
CETA01097408
271253
Gammaproteobacteria
CAT
Met
>WENV170337356
CETA01103010
271253
Gammaproteobacteria
CAT
Met
>WENV170337363
CETA01103836
452412
Gammaproteobacteria
GCC
Gly
>WENV170337415
CETA01110754
273756
Gammaproteobacteria
TGG
Pro
>WENV170337416
CETA01110754
281965
Gammaproteobacteria
TCT
Arg
>WENV170337504
CETA01124356
276973
Gammaproteobacteria
GAC
Val
>WENV170337517
CETA01127431
271253
Gammaproteobacteria
CAT
Met
>WENV170337534
CETA01128797
452332
Gammaproteobacteria
GTG
His
>WENV170337549
CETA01130544
273847
Gammaproteobacteria
CCT
Arg
>WENV170337569
CETA01131822
274204
Gammaproteobacteria
GGG
Pro
>WENV170337634
CETA01141711
456881
Gammaproteobacteria
GGC
Ala
>WENV170337635
CETA01141711
456878
Gammaproteobacteria
TTC
Glu
>WENV170337812
CETA01156031
271460
Gammaproteobacteria
CGG
Pro
>WENV170337828
CETA01163737
456706
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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