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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170564895
CZQC01000004
278155
Gammaproteobacteria
TGG
Pro
>WENV170564898
CZQC01000004
274148
Gammaproteobacteria
GTC
Asp
>WENV170564899
CZQC01000006
451922
Gammaproteobacteria
TGT
Thr
>WENV170564901
CZQC01000016
474503
Gammaproteobacteria
GTT
Asn
>WENV170564902
CZQC01000023
452407
Gammaproteobacteria
GAA
Phe
>WENV170564909
CZQC01000036
278579
Gammaproteobacteria
GTC
Asp
>WENV170564911
CZQC01000036
278579
Gammaproteobacteria
GTC
Asp
>WENV170564913
CZQC01000036
278579
Gammaproteobacteria
GTC
Asp
>WENV170564915
CZQC01000038
459752
Gammaproteobacteria
TTC
Glu
>WENV170564916
CZQC01000047
273328
Gammaproteobacteria
GAC
Val
>WENV170564918
CZQC01000048
474506
Gammaproteobacteria
GCC
Gly
>WENV170564922
CZQC01000050
274864
Gammaproteobacteria
ACG
Arg
>WENV170564923
CZQC01000050
274864
Gammaproteobacteria
ACG
Arg
>WENV170564926
CZQC01000066
474503
Gammaproteobacteria
GTT
Asn
>WENV170564927
CZQC01000066
278155
Gammaproteobacteria
TGG
Pro
>WENV170564928
CZQC01000066
457453
Gammaproteobacteria
TTT
Lys
>WENV170564929
CZQC01000066
457453
Gammaproteobacteria
TTT
Lys
>WENV170564933
CZQC01000067
474520
Gammaproteobacteria
CCA
Trp
>WENV170564934
CZQC01000068
459752
Gammaproteobacteria
TTC
Glu
>WENV170564935
CZQC01000068
474506
Gammaproteobacteria
GCC
Gly
>WENV170564936
CZQC01000068
459752
Gammaproteobacteria
TTC
Glu
>WENV170564937
CZQC01000068
474506
Gammaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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