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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180022331
FTFY01000950
273289
Betaproteobacteria
CAT
Met
>WENV180022334
FTFY01001006
273285
Betaproteobacteria
TCT
Arg
>WENV180022336
FTFY01001022
452923
Betaproteobacteria
TTT
Lys
>WENV180022326
FTFY01000870
780081
Betaproteobacteria
CCC
Gly
>WENV180022327
FTFY01000871
276012
Betaproteobacteria
TTG
Gln
>WENV180022337
FTFY01001028
45953
Betaproteobacteria
CGA
Ser
>WENV180022324
FTFY01000849
180358
Betaproteobacteria
CAG
Leu
>WENV180022343
FTFY01001154
180358
Betaproteobacteria
CAG
Leu
>WENV180022307
FTFY01000301
654880
Betaproteobacteria
GGT
Thr
>WENV180022319
FTFY01000808
452202
Betaproteobacteria
TAC
Val
>WENV180022329
FTFY01000937
452202
Betaproteobacteria
TAC
Val
>WENV180022346
FTFY01001183
112709
Betaproteobacteria
TAG
Leu
>WENV180022345
FTFY01001180
454348
Betaproteobacteria
GAA
Phe
>WENV180022344
FTFY01001154
8303
Betaproteobacteria
GCT
Ser
>WENV180022323
FTFY01000838
46296
Betaproteobacteria
TGA
Ser
>WENV180022332
FTFY01000987
457269
Betaproteobacteria
CTT
Lys
>WENV180022306
FTFY01000301
780079
Betaproteobacteria
TCC
Gly
>WENV180022294
FTFY01000092
113251
Betaproteobacteria
CAA
Leu
>WENV180022316
FTFY01000755
455934
Betaproteobacteria
TTC
Glu
>WENV180022317
FTFY01000755
455934
Betaproteobacteria
TTC
Glu
>WENV180022321
FTFY01000808
454349
Betaproteobacteria
CCG
Arg
>WENV180022328
FTFY01000894
454342
Betaproteobacteria
CCA
Trp
>WENV180022303
FTFY01000283
30661
Betaproteobacteria
GGA
Ser
>WENV180022325
FTFY01000864
653938
Betaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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