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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170656836
JTFO01049541
271705
Gammaproteobacteria
TGG
Pro
>WENV170656925
JTFO01062096
271705
Gammaproteobacteria
TGG
Pro
>WENV170657200
JTFO01100664
271705
Gammaproteobacteria
TGG
Pro
>WENV170656579
JTFO01026296
279420
Gammaproteobacteria
GAC
Val
>WENV170656580
JTFO01026296
279420
Gammaproteobacteria
GAC
Val
>WENV170656581
JTFO01026296
279420
Gammaproteobacteria
GAC
Val
>WENV170656647
JTFO01029850
30307
Gammaproteobacteria
TGA
Ser
>WENV170656761
JTFO01041429
30307
Gammaproteobacteria
TGA
Ser
>WENV170657206
JTFO01102273
277307
Gammaproteobacteria
GGG
Pro
>WENV170656218
JTFO01004979
454971
Gammaproteobacteria
TTT
Lys
>WENV170656219
JTFO01004979
454971
Gammaproteobacteria
TTT
Lys
>WENV170656988
JTFO01066650
454971
Gammaproteobacteria
TTT
Lys
>WENV170656989
JTFO01066650
454971
Gammaproteobacteria
TTT
Lys
>WENV170656504
JTFO01019824
455342
Gammaproteobacteria
TTC
Glu
>WENV170657085
JTFO01081392
455342
Gammaproteobacteria
TTC
Glu
>WENV170656960
JTFO01064806
270873
Gammaproteobacteria
GAT
Ile
>WENV170656299
JTFO01009015
179986
Gammaproteobacteria
TAG
Leu
>WENV170656120
JTFO01000378
780242
Gammaproteobacteria
GCA
Cys
>WENV170656806
JTFO01046115
12288
Gammaproteobacteria
GCT
Ser
>WENV170656324
JTFO01010066
451780
Gammaproteobacteria
GCC
Gly
>WENV170656325
JTFO01010067
451780
Gammaproteobacteria
GCC
Gly
>WENV170656326
JTFO01010067
451780
Gammaproteobacteria
GCC
Gly
>WENV170656327
JTFO01010067
451780
Gammaproteobacteria
GCC
Gly
>WENV170657079
JTFO01080562
451841
Gammaproteobacteria
GGC
Ala
>WENV170656160
JTFO01001950
86896
Gammaproteobacteria
GGA
Ser
>WENV170656398
JTFO01012563
452416
Gammaproteobacteria
TTT
Lys
>WENV170656978
JTFO01065816
452416
Gammaproteobacteria
TTT
Lys
>WENV170657375
JTFO01137503
271254
Gammaproteobacteria
CAT
Met
>WENV170657323
JTFO01124952
112870
Gammaproteobacteria
TAA
Leu
>WENV170656303
JTFO01009254
451779
Gammaproteobacteria
CAT
Met
>WENV170656775
JTFO01042645
275791
Gammaproteobacteria
GAT
Ile
>WENV170657328
JTFO01126797
275791
Gammaproteobacteria
GAT
Ile
>WENV170657340
JTFO01129300
275791
Gammaproteobacteria
GAT
Ile
>WENV170656140
JTFO01000843
779665
Gammaproteobacteria
GCA
Cys
>WENV170656465
JTFO01017852
654904
Gammaproteobacteria
CCT
Arg
>WENV170656690
JTFO01033797
218021
Gammaproteobacteria
GAG
Leu
>WENV170657235
JTFO01107194
274125
Gammaproteobacteria
TCT
Arg
>WENV170656628
JTFO01029256
5836
Gammaproteobacteria
>WENV170656633
JTFO01029469
274123
Gammaproteobacteria
CAT
Met
>WENV170656796
JTFO01044601
271459
Gammaproteobacteria
CCT
Arg
>WENV170656928
JTFO01062378
454460
Gammaproteobacteria
GTT
Asn
>WENV170656332
JTFO01010255
273869
Gammaproteobacteria
GTT
Asn
>WENV170656333
JTFO01010255
273869
Gammaproteobacteria
GTT
Asn
>WENV170657317
JTFO01123230
780241
Gammaproteobacteria
GCA
Cys
>WENV170656923
JTFO01061516
454425
Gammaproteobacteria
TGT
Thr
>WENV170656598
JTFO01026887
271868
Gammaproteobacteria
GAC
Val
>WENV170656464
JTFO01017802
270822
Gammaproteobacteria
CCA
Trp
>WENV170657201
JTFO01100664
451839
Gammaproteobacteria
GTG
His
>WENV170656295
JTFO01009015
179988
Gammaproteobacteria
TAG
Leu
>WENV170656730
JTFO01038656
179988
Gammaproteobacteria
TAG
Leu
>WENV170656732
JTFO01038656
179988
Gammaproteobacteria
TAG
Leu
>WENV170656772
JTFO01041989
179988
Gammaproteobacteria
TAG
Leu
>WENV170657440
JTFO01152648
179988
Gammaproteobacteria
TAG
Leu
>WENV170656528
JTFO01021406
270872
Gammaproteobacteria
CCG
Arg
>WENV170657426
JTFO01148661
180559
Gammaproteobacteria
CAA
Leu
>WENV170657415
JTFO01146030
451837
Gammaproteobacteria
TTC
Glu
>WENV170656133
JTFO01000704
456234
Gammaproteobacteria
GAA
Phe
>WENV170656999
JTFO01067169
452414
Gammaproteobacteria
TTC
Glu
>WENV170656307
JTFO01009464
657394
Gammaproteobacteria
GGT
Thr
>WENV170657397
JTFO01140437
657394
Gammaproteobacteria
GGT
Thr
>WENV170657396
JTFO01140437
657393
Gammaproteobacteria
TCC
Gly
>WENV170656306
JTFO01009464
657393
Gammaproteobacteria
TCC
Gly
>WENV170656612
JTFO01027951
270819
Gammaproteobacteria
ACG
Arg
>WENV170656805
JTFO01046115
270819
Gammaproteobacteria
ACG
Arg
>WENV170657360
JTFO01135257
281170
Gammaproteobacteria
TCT
Arg
>WENV170656298
JTFO01009015
179987
Gammaproteobacteria
TAG
Leu
>WENV170656139
JTFO01000843
112298
Gammaproteobacteria
TAA
Leu
>WENV170656613
JTFO01027951
270875
Gammaproteobacteria
ACG
Arg
>WENV170656807
JTFO01046115
270875
Gammaproteobacteria
ACG
Arg
>WENV170657010
JTFO01069321
275485
Gammaproteobacteria
GTC
Asp
>WENV170656266
JTFO01007442
451781
Gammaproteobacteria
GGT
Thr
>WENV170656296
JTFO01009015
653554
Gammaproteobacteria
TTG
Gln
>WENV170656300
JTFO01009015
653554
Gammaproteobacteria
TTG
Gln
>WENV170656302
JTFO01009015
653554
Gammaproteobacteria
TTG
Gln
>WENV170656731
JTFO01038656
653554
Gammaproteobacteria
TTG
Gln
>WENV170656734
JTFO01038656
653554
Gammaproteobacteria
TTG
Gln
>WENV170657439
JTFO01152648
653554
Gammaproteobacteria
TTG
Gln
>WENV170656969
JTFO01065247
452407
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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