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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705154
LLEP01011341
452917
Alphaproteobacteria
TAC
Val
>WENV170705155
LLEP01011860
273805
Alphaproteobacteria
ACG
Arg
>WENV170705132
LLEP01005108
465413
Alphaproteobacteria
TGC
Ala
>WENV170705169
LLEP01015203
45799
Alphaproteobacteria
GCT
Ser
>WENV170705092
LLEP01000172
452629
Alphaproteobacteria
GAA
Phe
>WENV170705098
LLEP01000421
452629
Alphaproteobacteria
GAA
Phe
>WENV170705070
LLEP01000009
655270
Alphaproteobacteria
GAA
Phe
>WENV170705063
LLEP01000006
274107
Alphaproteobacteria
CCT
Arg
>WENV170705164
LLEP01014509
270796
Alphaproteobacteria
GTC
Asp
>WENV170705072
LLEP01000011
485258
Alphaproteobacteria
GGC
Ala
>WENV170705066
LLEP01000008
112802
Alphaproteobacteria
GAG
Leu
>WENV170705086
LLEP01000063
112802
Alphaproteobacteria
GAG
Leu
>WENV170705099
LLEP01000447
112802
Alphaproteobacteria
GAG
Leu
>WENV170705157
LLEP01012633
273299
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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