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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170709719
LNFM01000623
779495
Gammaproteobacteria
CCC
Gly
>WENV170712150
LNFM01010189
298494
Gammaproteobacteria
CGG
Pro
>WENV170712595
LNFM01015332
298494
Gammaproteobacteria
CGG
Pro
>WENV170712790
LNFM01017796
298494
Gammaproteobacteria
CGG
Pro
>WENV170714129
LNFM01056129
298494
Gammaproteobacteria
CGG
Pro
>WENV170712057
LNFM01009490
301036
Gammaproteobacteria
GAT
Ile
>WENV170714935
LNFM01117148
270982
Gammaproteobacteria
GAT
Ile
>WENV170711743
LNFM01006984
282481
Gammaproteobacteria
CCG
Arg
>WENV170714182
LNFM01059364
273532
Gammaproteobacteria
TGG
Pro
>WENV170713417
LNFM01030587
180778
Gammaproteobacteria
TAG
Leu
>WENV170711077
LNFM01003450
273023
Gammaproteobacteria
CAT
Met
>WENV170709879
LNFM01000844
780592
Gammaproteobacteria
CCC
Gly
>WENV170709691
LNFM01000593
780592
Gammaproteobacteria
CCC
Gly
>WENV170711496
LNFM01005528
275519
Gammaproteobacteria
CAT
Met
>WENV170713951
LNFM01047970
275518
Gammaproteobacteria
ACG
Arg
>WENV170712011
LNFM01009076
49976
Gammaproteobacteria
TGA
Ser
>WENV170709867
LNFM01000825
452377
Gammaproteobacteria
GTT
Asn
>WENV170711226
LNFM01004115
452377
Gammaproteobacteria
GTT
Asn
>WENV170711438
LNFM01005230
270906
Gammaproteobacteria
CCG
Arg
>WENV170712476
LNFM01013795
270906
Gammaproteobacteria
CCG
Arg
>WENV170715045
LNFM01128067
270906
Gammaproteobacteria
CCG
Arg
>WENV170709566
LNFM01000478
281567
Gammaproteobacteria
CAT
Met
>WENV170711069
LNFM01003434
454471
Gammaproteobacteria
TGT
Thr
>WENV170712604
LNFM01015383
474623
Gammaproteobacteria
GGT
Thr
>WENV170711630
LNFM01006158
474623
Gammaproteobacteria
GGT
Thr
>WENV170713332
LNFM01028606
113151
Gammaproteobacteria
CAG
Leu
>WENV170711468
LNFM01005384
658290
Gammaproteobacteria
TTG
Gln
>WENV170710826
LNFM01002754
270904
Gammaproteobacteria
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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