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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170740297
LULR01004759
275465
Gammaproteobacteria
GAC
Val
>WENV170739940
LULR01000038
454974
Gammaproteobacteria
TAC
Val
>WENV170739923
LULR01000014
273863
Gammaproteobacteria
GGG
Pro
>WENV170739951
LULR01000057
454971
Gammaproteobacteria
TTT
Lys
>WENV170740232
LULR01003327
271464
Gammaproteobacteria
TGG
Pro
>WENV170740234
LULR01003327
452415
Gammaproteobacteria
GTG
His
>WENV170740428
LULR01008896
270982
Gammaproteobacteria
GAT
Ile
>WENV170739926
LULR01000014
780242
Gammaproteobacteria
GCA
Cys
>WENV170739966
LULR01000072
655198
Gammaproteobacteria
TTG
Gln
>WENV170739948
LULR01000048
451784
Gammaproteobacteria
GAA
Phe
>WENV170740539
LULR01015161
451784
Gammaproteobacteria
GAA
Phe
>WENV170740434
LULR01009135
271458
Gammaproteobacteria
GGG
Pro
>WENV170740119
LULR01001277
452416
Gammaproteobacteria
TTT
Lys
>WENV170740075
LULR01000681
271254
Gammaproteobacteria
CAT
Met
>WENV170740045
LULR01000466
464809
Gammaproteobacteria
GAA
Phe
>WENV170740233
LULR01003327
275462
Gammaproteobacteria
TCT
Arg
>WENV170740007
LULR01000214
46215
Gammaproteobacteria
GCT
Ser
>WENV170740064
LULR01000574
452412
Gammaproteobacteria
GCC
Gly
>WENV170740140
LULR01001595
452412
Gammaproteobacteria
GCC
Gly
>WENV170740305
LULR01004940
273850
Gammaproteobacteria
GAT
Ile
>WENV170740094
LULR01000949
271460
Gammaproteobacteria
CGG
Pro
>WENV170740399
LULR01008070
452404
Gammaproteobacteria
TGT
Thr
>WENV170740050
LULR01000498
271459
Gammaproteobacteria
CCT
Arg
>WENV170740659
LULR01026184
179960
Gammaproteobacteria
TAG
Leu
>WENV170739941
LULR01000038
273869
Gammaproteobacteria
GTT
Asn
>WENV170740008
LULR01000214
271456
Gammaproteobacteria
ACG
Arg
>WENV170740575
LULR01017052
451732
Gammaproteobacteria
GCC
Gly
>WENV170740660
LULR01026184
779459
Gammaproteobacteria
CCA
Trp
>WENV170740389
LULR01007744
112371
Gammaproteobacteria
CAA
Leu
>WENV170740324
LULR01005496
452410
Gammaproteobacteria
TAC
Val
>WENV170740636
LULR01023505
276972
Gammaproteobacteria
CCA
Trp
>WENV170739965
LULR01000072
180500
Gammaproteobacteria
TAG
Leu
>WENV170739927
LULR01000014
112817
Gammaproteobacteria
TAA
Leu
>WENV170740003
LULR01000192
452414
Gammaproteobacteria
TTC
Glu
>WENV170740063
LULR01000574
452414
Gammaproteobacteria
TTC
Glu
>WENV170740066
LULR01000592
466186
Gammaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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