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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170844059
MDSZ01271465
779495
Gammaproteobacteria
CCC
Gly
>WENV170835471
MDSZ01114636
779604
Gammaproteobacteria
GCA
Cys
>WENV170837084
MDSZ01142956
779604
Gammaproteobacteria
GCA
Cys
>WENV170842292
MDSZ01237527
779604
Gammaproteobacteria
GCA
Cys
>WENV170838000
MDSZ01159412
457453
Gammaproteobacteria
TTT
Lys
>WENV170842393
MDSZ01239447
457453
Gammaproteobacteria
TTT
Lys
>WENV170832237
MDSZ01058076
278579
Gammaproteobacteria
GTC
Asp
>WENV170835877
MDSZ01121420
278579
Gammaproteobacteria
GTC
Asp
>WENV170842138
MDSZ01234920
278579
Gammaproteobacteria
GTC
Asp
>WENV170844117
MDSZ01272415
278579
Gammaproteobacteria
GTC
Asp
>WENV170829038
MDSZ01001919
271464
Gammaproteobacteria
TGG
Pro
>WENV170833237
MDSZ01076380
271464
Gammaproteobacteria
TGG
Pro
>WENV170834309
MDSZ01095074
271464
Gammaproteobacteria
TGG
Pro
>WENV170836097
MDSZ01124955
271464
Gammaproteobacteria
TGG
Pro
>WENV170836509
MDSZ01132731
271464
Gammaproteobacteria
TGG
Pro
>WENV170842071
MDSZ01233510
271464
Gammaproteobacteria
TGG
Pro
>WENV170836102
MDSZ01125057
274150
Gammaproteobacteria
CAT
Met
>WENV170834001
MDSZ01089840
274150
Gammaproteobacteria
CAT
Met
>WENV170840940
MDSZ01213686
284350
Gammaproteobacteria
TCT
Arg
>WENV170839291
MDSZ01183095
653594
Gammaproteobacteria
CCT
Arg
>WENV170832632
MDSZ01065799
474520
Gammaproteobacteria
CCA
Trp
>WENV170833831
MDSZ01086679
278942
Gammaproteobacteria
CCG
Arg
>WENV170840464
MDSZ01204848
278942
Gammaproteobacteria
CCG
Arg
>WENV170836566
MDSZ01133823
467367
Gammaproteobacteria
GGT
Thr
>WENV170834793
MDSZ01102926
300085
Gammaproteobacteria
ACG
Arg
>WENV170840693
MDSZ01209324
456706
Gammaproteobacteria
TGT
Thr
>WENV170842449
MDSZ01240639
276974
Gammaproteobacteria
GGG
Pro
>WENV170837722
MDSZ01154447
502832
Gammaproteobacteria
GAA
Phe
>WENV170841474
MDSZ01222777
458351
Gammaproteobacteria
TTG
Gln
>WENV170830450
MDSZ01027097
458351
Gammaproteobacteria
TTG
Gln
>WENV170840079
MDSZ01197675
452413
Gammaproteobacteria
GGC
Ala
>WENV170838645
MDSZ01171708
463383
Gammaproteobacteria
CCA
Trp
>WENV170833608
MDSZ01082858
30865
Gammaproteobacteria
GCT
Ser
>WENV170838626
MDSZ01171421
276971
Gammaproteobacteria
ACG
Arg
>WENV170832595
MDSZ01065300
276971
Gammaproteobacteria
ACG
Arg
>WENV170833900
MDSZ01087972
274864
Gammaproteobacteria
ACG
Arg
>WENV170842824
MDSZ01248007
274864
Gammaproteobacteria
ACG
Arg
>WENV170843922
MDSZ01269006
274864
Gammaproteobacteria
ACG
Arg
>WENV170844134
MDSZ01272698
278155
Gammaproteobacteria
TGG
Pro
>WENV170835954
MDSZ01122522
278155
Gammaproteobacteria
TGG
Pro
>WENV170829603
MDSZ01011547
278155
Gammaproteobacteria
TGG
Pro
>WENV170829300
MDSZ01006301
278155
Gammaproteobacteria
TGG
Pro
>WENV170837769
MDSZ01155168
271458
Gammaproteobacteria
GGG
Pro
>WENV170829526
MDSZ01010508
273122
Gammaproteobacteria
CAT
Met
>WENV170829527
MDSZ01010508
273122
Gammaproteobacteria
CAT
Met
>WENV170834683
MDSZ01101289
464809
Gammaproteobacteria
GAA
Phe
>WENV170839195
MDSZ01181624
276973
Gammaproteobacteria
GAC
Val
>WENV170837281
MDSZ01146302
276973
Gammaproteobacteria
GAC
Val
>WENV170830922
MDSZ01035315
276973
Gammaproteobacteria
GAC
Val
>WENV170837934
MDSZ01158330
179997
Gammaproteobacteria
GTA
Tyr
>WENV170837849
MDSZ01156700
271287
Gammaproteobacteria
CAT
Met
>WENV170836554
MDSZ01133730
278982
Gammaproteobacteria
CCG
Arg
>WENV170832140
MDSZ01056854
278982
Gammaproteobacteria
CCG
Arg
>WENV170839228
MDSZ01182110
452412
Gammaproteobacteria
GCC
Gly
>WENV170843271
MDSZ01257102
460378
Gammaproteobacteria
TAC
Val
>WENV170830090
MDSZ01020664
460378
Gammaproteobacteria
TAC
Val
>WENV170839662
MDSZ01189771
451876
Gammaproteobacteria
GTG
His
>WENV170836582
MDSZ01134131
780765
Gammaproteobacteria
CCC
Gly
>WENV170843457
MDSZ01260839
271460
Gammaproteobacteria
CGG
Pro
>WENV170835975
MDSZ01122890
452404
Gammaproteobacteria
TGT
Thr
>WENV170835993
MDSZ01123227
180498
Gammaproteobacteria
TAG
Leu
>WENV170842491
MDSZ01241593
275549
Gammaproteobacteria
CAT
Met
>WENV170831523
MDSZ01045797
271459
Gammaproteobacteria
CCT
Arg
>WENV170837596
MDSZ01151876
179999
Gammaproteobacteria
CAA
Leu
>WENV170829303
MDSZ01006301
274148
Gammaproteobacteria
GTC
Asp
>WENV170831230
MDSZ01040681
274148
Gammaproteobacteria
GTC
Asp
>WENV170840498
MDSZ01205701
271200
Gammaproteobacteria
CAT
Met
>WENV170843375
MDSZ01259088
273327
Gammaproteobacteria
ACG
Arg
>WENV170839314
MDSZ01183550
271456
Gammaproteobacteria
ACG
Arg
>WENV170833220
MDSZ01076033
271456
Gammaproteobacteria
ACG
Arg
>WENV170836638
MDSZ01135075
273754
Gammaproteobacteria
GTT
Asn
>WENV170844010
MDSZ01270723
273754
Gammaproteobacteria
GTT
Asn
>WENV170834140
MDSZ01092702
459731
Gammaproteobacteria
GGT
Thr
>WENV170834801
MDSZ01103054
113485
Gammaproteobacteria
CAA
Leu
>WENV170831008
MDSZ01037029
113485
Gammaproteobacteria
CAA
Leu
>WENV170836828
MDSZ01138300
45712
Gammaproteobacteria
GGA
Ser
>WENV170831416
MDSZ01043847
780241
Gammaproteobacteria
GCA
Cys
>WENV170838111
MDSZ01161784
780241
Gammaproteobacteria
GCA
Cys
>WENV170842662
MDSZ01245085
452881
Gammaproteobacteria
TGT
Thr
>WENV170837365
MDSZ01147906
452881
Gammaproteobacteria
TGT
Thr
>WENV170832966
MDSZ01071568
86900
Gammaproteobacteria
TGA
Ser
>WENV170840402
MDSZ01203889
273121
Gammaproteobacteria
GAC
Val
>WENV170830353
MDSZ01025543
271613
Gammaproteobacteria
GTC
Asp
>WENV170837848
MDSZ01156690
271613
Gammaproteobacteria
GTC
Asp
>WENV170832038
MDSZ01055134
112371
Gammaproteobacteria
CAA
Leu
>WENV170834224
MDSZ01093963
277966
Gammaproteobacteria
CAT
Met
>WENV170831382
MDSZ01043153
276972
Gammaproteobacteria
CCA
Trp
>WENV170832974
MDSZ01071640
276972
Gammaproteobacteria
CCA
Trp
>WENV170835203
MDSZ01109578
276972
Gammaproteobacteria
CCA
Trp
>WENV170830451
MDSZ01027097
271286
Gammaproteobacteria
CAT
Met
>WENV170841889
MDSZ01230548
459319
Gammaproteobacteria
GAA
Phe
>WENV170837840
MDSZ01156439
453897
Gammaproteobacteria
TAC
Val
>WENV170842695
MDSZ01245908
454397
Gammaproteobacteria
TGT
Thr
>WENV170839494
MDSZ01186436
455237
Gammaproteobacteria
TGT
Thr
>WENV170832040
MDSZ01055134
452414
Gammaproteobacteria
TTC
Glu
>WENV170840080
MDSZ01197675
452414
Gammaproteobacteria
TTC
Glu
>WENV170834174
MDSZ01093288
466510
Gammaproteobacteria
GCC
Gly
>WENV170843033
MDSZ01252736
112814
Gammaproteobacteria
GAG
Leu
>WENV170841798
MDSZ01228998
276975
Gammaproteobacteria
TGG
Pro
>WENV170832968
MDSZ01071568
779494
Gammaproteobacteria
GCA
Cys
>WENV170835976
MDSZ01122890
184132
Gammaproteobacteria
GTA
Tyr
>WENV170842205
MDSZ01235972
481051
Gammaproteobacteria
TAC
Val
>WENV170842279
MDSZ01237288
275485
Gammaproteobacteria
GTC
Asp
>WENV170843857
MDSZ01267761
271316
Gammaproteobacteria
CAT
Met
>WENV170842350
MDSZ01238821
30792
Gammaproteobacteria
GGA
Ser
>WENV170834530
MDSZ01098748
273328
Gammaproteobacteria
GAC
Val
>WENV170829330
MDSZ01006894
273328
Gammaproteobacteria
GAC
Val
>WENV170843034
MDSZ01252736
271253
Gammaproteobacteria
CAT
Met
>WENV170843704
MDSZ01264905
274093
Gammaproteobacteria
GTC
Asp
>WENV170838121
MDSZ01162064
270904
Gammaproteobacteria
CGG
Pro
>WENV170834195
MDSZ01093554
117395
Gammaproteobacteria
CAG
Leu
>WENV170834035
MDSZ01090752
117395
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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