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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV08000701
ABMI01004079
236256
Alphaproteobacteria
TAC
Val
>ENV08000702
ABMI01005784
23468
Alphaproteobacteria
GCT
Ser
>ENV08000705
ABMI01006363
338760
Alphaproteobacteria
GAA
Phe
>ENV08000717
ABMI01012034
145689
Alphaproteobacteria
CCT
Arg
>ENV08000718
ABMI01012067
282595
Alphaproteobacteria
CCA
Trp
>ENV08000719
ABMI01015729
282595
Alphaproteobacteria
CCA
Trp
>ENV08000751
ABMI01073586
338757
Alphaproteobacteria
GAC
Val
>ENV08000776
ABMI01157640
280207
Alphaproteobacteria
TGC
Ala
>ENV08000783
ABMI01208118
145688
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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