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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>ENV09001666
ACQI01001629
159395
Alphaproteobacteria
GTC
Asp
>ENV09001667
ACQI01001629
159395
Alphaproteobacteria
GTC
Asp
>ENV09001711
ACQI01003271
23671
Alphaproteobacteria
CGA
Ser
>ENV09001723
ACQI01003632
147656
Alphaproteobacteria
GAT
Ile
>ENV09001725
ACQI01003694
237740
Alphaproteobacteria
TTT
Lys
>ENV09001771
ACQI01005320
147088
Alphaproteobacteria
CCT
Arg
>ENV09001785
ACQI01005993
348781
Alphaproteobacteria
GAA
Phe
>ENV09001829
ACQI01012175
413302
Alphaproteobacteria
CCC
Gly
>ENV09001836
ACQI01013571
163860
Alphaproteobacteria
GGG
Pro
>ENV09001873
ACQI01019484
113700
Alphaproteobacteria
>ENV09001875
ACQI01019661
147083
Alphaproteobacteria
GGG
Pro
>ENV09001882
ACQI01021036
239168
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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