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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170002507
AGTN01053076
378157
Bacillota
TTC
Glu
>WENV170004632
AGTN01742122
339716
Bacillota
>WENV170002933
AGTN01172452
235134
Bacillota
GAA
Phe
>WENV170002802
AGTN01134555
237701
Bacillota
TGT
Thr
>WENV170004499
AGTN01700821
106090
Bacillota
TAG
Leu
>WENV170003419
AGTN01329456
281701
Bacillota
TGC
Ala
>WENV170002401
AGTN01019570
169927
Bacillota
GTC
Asp
>WENV170003422
AGTN01329496
379268
Bacillota
TTC
Glu
>WENV170004595
AGTN01733793
379268
Bacillota
TTC
Glu
>WENV170003517
AGTN01366485
411792
Bacillota
GCA
Cys
>WENV170004252
AGTN01618419
156937
Bacillota
GTG
His
>WENV170003014
AGTN01195724
164085
Bacillota
ACG
Arg
>WENV170002760
AGTN01122073
236206
Bacillota
CCA
Trp
>WENV170002434
AGTN01028558
271471
Bacillota
GCC
Gly
>WENV170003671
AGTN01413392
147185
Bacillota
CCT
Arg
>WENV170002342
AGTN01000073
338439
Bacillota
GCC
Gly
>WENV170003681
AGTN01416284
348433
Bacillota
TTC
Glu
>WENV170002435
AGTN01028854
173810
Bacillota
CAT
Met
>WENV170002397
AGTN01018049
257470
Bacillota
GGT
Thr
>WENV170003740
AGTN01433910
240017
Bacillota
GCC
Gly
>WENV170003569
AGTN01379433
256195
Bacillota
TGG
Pro
>WENV170002709
AGTN01110582
18852
Bacillota
GCT
Ser
>WENV170003338
AGTN01304006
126732
Bacillota
GGG
Pro
>WENV170002825
AGTN01140020
154748
Bacillota
GTC
Asp
>WENV170004010
AGTN01534372
154748
Bacillota
GTC
Asp
>WENV170003536
AGTN01369410
238804
Bacillota
TTC
Glu
>WENV170002676
AGTN01098939
301896
Bacillota
TAC
Val
>WENV170003841
AGTN01470285
301896
Bacillota
TAC
Val
>WENV170003901
AGTN01496339
301896
Bacillota
TAC
Val
>WENV170002526
AGTN01058722
245386
Bacillota
CCA
Trp
>WENV170003492
AGTN01354492
258997
Bacillota
CTT
Lys
>WENV170003353
AGTN01307380
298639
Bacillota
GTT
Asn
>WENV170004270
AGTN01623107
413503
Bacillota
CCA
Trp
>WENV170003914
AGTN01499508
345314
Bacillota
TTG
Gln
>WENV170002941
AGTN01174659
243234
Bacillota
TGG
Pro
>WENV170002657
AGTN01094379
157838
Bacillota
GTC
Asp
>WENV170003983
AGTN01525398
157838
Bacillota
GTC
Asp
>WENV170004630
AGTN01742087
157838
Bacillota
GTC
Asp
>WENV170004602
AGTN01735778
149274
Bacillota
>WENV170003840
AGTN01470285
353288
Bacillota
TTC
Glu
>WENV170004385
AGTN01665446
247734
Bacillota
TGC
Ala
>WENV170004631
AGTN01742122
256930
Bacillota
TTT
Lys
>WENV170003428
AGTN01330271
238834
Bacillota
TTT
Lys
>WENV170003329
AGTN01300507
100976
Bacillota
GTA
Tyr
>WENV170004408
AGTN01669977
248965
Bacillota
GCC
Gly
>WENV170004029
AGTN01541211
254427
Bacillota
TTC
Glu
>WENV170002512
AGTN01055409
238857
Bacillota
CCA
Trp
>WENV170002593
AGTN01077986
159264
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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