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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015708
AZII01004139
95633
Gammaproteobacteria
GTA
Tyr
>WENV170015684
AZII01002823
115067
Gammaproteobacteria
GTA
Tyr
>WENV170015700
AZII01003518
173648
Gammaproteobacteria
TCT
Arg
>WENV170015757
AZII01006591
17426
Gammaproteobacteria
GCT
Ser
>WENV170015630
AZII01000080
235452
Gammaproteobacteria
GAA
Phe
>WENV170015643
AZII01000740
235452
Gammaproteobacteria
GAA
Phe
>WENV170015786
AZII01009150
235452
Gammaproteobacteria
GAA
Phe
>WENV170015801
AZII01010210
235452
Gammaproteobacteria
GAA
Phe
>WENV170015678
AZII01002590
146791
Gammaproteobacteria
GAC
Val
>WENV170015795
AZII01009827
45345
Gammaproteobacteria
GGA
Ser
>WENV170015691
AZII01003361
421020
Gammaproteobacteria
GCA
Cys
>WENV170015742
AZII01005870
148452
Gammaproteobacteria
CCT
Arg
>WENV170015777
AZII01008552
241136
Gammaproteobacteria
TTG
Gln
>WENV170015791
AZII01009664
241136
Gammaproteobacteria
TTG
Gln
>WENV170015633
AZII01000253
243485
Gammaproteobacteria
TGT
Thr
>WENV170015637
AZII01000422
249892
Gammaproteobacteria
GTT
Asn
>WENV170015701
AZII01003820
249892
Gammaproteobacteria
GTT
Asn
>WENV170015745
AZII01006279
237421
Gammaproteobacteria
TGT
Thr
>WENV170015671
AZII01002370
247088
Gammaproteobacteria
CCA
Trp
>WENV170015724
AZII01005223
411735
Gammaproteobacteria
GCA
Cys
>WENV170015656
AZII01001343
175964
Gammaproteobacteria
CAT
Met
>WENV170015765
AZII01007414
175964
Gammaproteobacteria
CAT
Met
>WENV170015770
AZII01008292
59485
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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