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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170019743
BBPE01000400
294226
Alphaproteobacteria
>WENV170019683
BBPE01000054
339306
Alphaproteobacteria
>WENV170020718
BBPE01020644
146628
Alphaproteobacteria
ACG
Arg
>WENV170020723
BBPE01020807
339325
Alphaproteobacteria
CAC
Val
>WENV170019700
BBPE01000093
174413
Alphaproteobacteria
CAT
Met
>WENV170020166
BBPE01003583
164887
Alphaproteobacteria
CCA
Trp
>WENV170020562
BBPE01011975
282595
Alphaproteobacteria
CCA
Trp
>WENV170020030
BBPE01002211
146578
Alphaproteobacteria
CGG
Pro
>WENV170019797
BBPE01000625
257056
Alphaproteobacteria
CGT
Thr
>WENV170020386
BBPE01006879
418532
Alphaproteobacteria
CTG
Gln
>WENV170019681
BBPE01000046
294221
Alphaproteobacteria
GAA
Phe
>WENV170020535
BBPE01011003
338289
Alphaproteobacteria
GAC
Val
>WENV170020210
BBPE01004194
365250
Alphaproteobacteria
GCC
Gly
>WENV170020676
BBPE01017743
23561
Alphaproteobacteria
GGA
Ser
>WENV170020129
BBPE01003229
148845
Alphaproteobacteria
GGG
Pro
>WENV170020176
BBPE01003752
148845
Alphaproteobacteria
GGG
Pro
>WENV170019754
BBPE01000495
145341
Alphaproteobacteria
GGG
Pro
>WENV170020036
BBPE01002236
366499
Alphaproteobacteria
GGT
Thr
>WENV170019821
BBPE01000773
182651
Alphaproteobacteria
GTC
Asp
>WENV170020790
BBPE01029086
338269
Alphaproteobacteria
GTT
Asn
>WENV170020550
BBPE01011459
338282
Alphaproteobacteria
GTT
Asn
>WENV170020603
BBPE01014001
303708
Alphaproteobacteria
TGC
Ala
>WENV170019719
BBPE01000220
251610
Alphaproteobacteria
TGC
Ala
>WENV170019749
BBPE01000458
202510
Alphaproteobacteria
TGG
Pro
>WENV170019894
BBPE01001225
202510
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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