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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170148275
CENZ01295154
312287
Gammaproteobacteria
TGT
Thr
>WENV170148161
CENZ01225028
147048
Gammaproteobacteria
CCA
Trp
>WENV170146487
CENZ01057995
443007
Gammaproteobacteria
CCC
Gly
>WENV170148110
CENZ01204194
283668
Gammaproteobacteria
TTT
Lys
>WENV170146701
CENZ01073067
290337
Gammaproteobacteria
TAC
Val
>WENV170147390
CENZ01142986
61925
Gammaproteobacteria
TAA
Leu
>WENV170146993
CENZ01101400
241476
Gammaproteobacteria
TTT
Lys
>WENV170148336
CENZ01324145
171935
Gammaproteobacteria
ACG
Arg
>WENV170145662
CENZ01003150
185163
Gammaproteobacteria
ACG
Arg
>WENV170145663
CENZ01003150
185163
Gammaproteobacteria
ACG
Arg
>WENV170145976
CENZ01023994
240642
Gammaproteobacteria
GTT
Asn
>WENV170146324
CENZ01046940
322642
Gammaproteobacteria
GGT
Thr
>WENV170146892
CENZ01092149
322642
Gammaproteobacteria
GGT
Thr
>WENV170147349
CENZ01137292
148148
Gammaproteobacteria
GAC
Val
>WENV170146652
CENZ01069804
52727
Gammaproteobacteria
GGA
Ser
>WENV170146231
CENZ01042069
411766
Gammaproteobacteria
GCA
Cys
>WENV170145661
CENZ01003150
10767
Gammaproteobacteria
GCT
Ser
>WENV170147453
CENZ01150771
173040
Gammaproteobacteria
GAC
Val
>WENV170146716
CENZ01074759
341782
Gammaproteobacteria
TTG
Gln
>WENV170146827
CENZ01084655
145713
Gammaproteobacteria
CAT
Met
>WENV170147286
CENZ01129560
145713
Gammaproteobacteria
CAT
Met
>WENV170147705
CENZ01179979
145713
Gammaproteobacteria
CAT
Met
>WENV170148150
CENZ01212487
16396
Gammaproteobacteria
TGA
Ser
>WENV170146907
CENZ01093719
27873
Gammaproteobacteria
TGA
Ser
>WENV170145816
CENZ01012867
412373
Gammaproteobacteria
GCA
Cys
>WENV170147050
CENZ01106433
195303
Gammaproteobacteria
GAT
Ile
>WENV170146689
CENZ01072323
243485
Gammaproteobacteria
TGT
Thr
>WENV170145937
CENZ01021895
59658
Gammaproteobacteria
CAA
Leu
>WENV170146910
CENZ01093719
245151
Gammaproteobacteria
GTG
His
>WENV170146315
CENZ01046627
16460
Gammaproteobacteria
TGA
Ser
>WENV170146533
CENZ01061323
22336
Gammaproteobacteria
GCT
Ser
>WENV170145685
CENZ01004132
190809
Gammaproteobacteria
GGG
Pro
>WENV170146804
CENZ01082171
190809
Gammaproteobacteria
GGG
Pro
>WENV170147092
CENZ01111375
190809
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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