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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170384742
CETY01011021
185163
Gammaproteobacteria
ACG
Arg
>WENV170384743
CETY01011021
185163
Gammaproteobacteria
ACG
Arg
>WENV170385369
CETY01064156
199268
Gammaproteobacteria
ACG
Arg
>WENV170386870
CETY01198105
59658
Gammaproteobacteria
CAA
Leu
>WENV170386589
CETY01183726
145261
Gammaproteobacteria
CAT
Met
>WENV170385501
CETY01073132
145713
Gammaproteobacteria
CAT
Met
>WENV170386491
CETY01175557
182320
Gammaproteobacteria
CAT
Met
>WENV170387539
CETY01447042
149036
Gammaproteobacteria
CCA
Trp
>WENV170387638
CETY01454797
166654
Gammaproteobacteria
GAC
Val
>WENV170386860
CETY01198055
149037
Gammaproteobacteria
GAC
Val
>WENV170385930
CETY01116962
411842
Gammaproteobacteria
GCA
Cys
>WENV170387575
CETY01450299
432501
Gammaproteobacteria
GCA
Cys
>WENV170385846
CETY01107958
238510
Gammaproteobacteria
GCC
Gly
>WENV170385847
CETY01107958
238510
Gammaproteobacteria
GCC
Gly
>WENV170385848
CETY01107958
238510
Gammaproteobacteria
GCC
Gly
>WENV170385929
CETY01116962
270352
Gammaproteobacteria
GCC
Gly
>WENV170387600
CETY01452499
56510
Gammaproteobacteria
GGA
Ser
>WENV170384656
CETY01004428
16840
Gammaproteobacteria
GGA
Ser
>WENV170385164
CETY01045726
248041
Gammaproteobacteria
GGC
Ala
>WENV170385742
CETY01097578
160030
Gammaproteobacteria
GGG
Pro
>WENV170385525
CETY01075051
190809
Gammaproteobacteria
GGG
Pro
>WENV170386827
CETY01197579
319963
Gammaproteobacteria
GGT
Thr
>WENV170385031
CETY01032992
322642
Gammaproteobacteria
GGT
Thr
>WENV170385738
CETY01097524
322642
Gammaproteobacteria
GGT
Thr
>WENV170386162
CETY01138748
322642
Gammaproteobacteria
GGT
Thr
>WENV170385935
CETY01117122
240084
Gammaproteobacteria
GGT
Thr
>WENV170387261
CETY01377942
147324
Gammaproteobacteria
GTG
His
>WENV170386873
CETY01198134
147053
Gammaproteobacteria
GTT
Asn
>WENV170385146
CETY01043686
240642
Gammaproteobacteria
GTT
Asn
>WENV170386518
CETY01178055
189760
Gammaproteobacteria
TGG
Pro
>WENV170386832
CETY01197625
189760
Gammaproteobacteria
TGG
Pro
>WENV170385320
CETY01059291
312287
Gammaproteobacteria
TGT
Thr
>WENV170385691
CETY01093789
312287
Gammaproteobacteria
TGT
Thr
>WENV170385703
CETY01095105
312287
Gammaproteobacteria
TGT
Thr
>WENV170385303
CETY01056748
237421
Gammaproteobacteria
TGT
Thr
>WENV170385306
CETY01057186
288517
Gammaproteobacteria
TGT
Thr
>WENV170387128
CETY01330846
301232
Gammaproteobacteria
TTC
Glu
>WENV170385373
CETY01064224
294663
Gammaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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