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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170537286
CEWQ01052810
95975
Gammaproteobacteria
GAG
Leu
>WENV170537102
CEWQ01002949
237225
Gammaproteobacteria
GCC
Gly
>WENV170537116
CEWQ01006036
17426
Gammaproteobacteria
GCT
Ser
>WENV170537194
CEWQ01024834
26080
Gammaproteobacteria
GGA
Ser
>WENV170537095
CEWQ01000412
311624
Gammaproteobacteria
GTG
His
>WENV170537142
CEWQ01011072
279806
Gammaproteobacteria
TGT
Thr
>WENV170537232
CEWQ01032848
146644
Gammaproteobacteria
GGG
Pro
>WENV170537262
CEWQ01041461
237221
Gammaproteobacteria
GGC
Ala
>WENV170537280
CEWQ01051542
426403
Gammaproteobacteria
GCA
Cys
>WENV170537151
CEWQ01015007
146641
Gammaproteobacteria
ACG
Arg
>WENV170537111
CEWQ01005098
199268
Gammaproteobacteria
ACG
Arg
>WENV170537104
CEWQ01002950
95870
Gammaproteobacteria
TAA
Leu
>WENV170537100
CEWQ01002066
319100
Gammaproteobacteria
GGT
Thr
>WENV170537170
CEWQ01018915
146642
Gammaproteobacteria
CCA
Trp
>WENV170537266
CEWQ01044213
193253
Gammaproteobacteria
CAT
Met
>WENV170537238
CEWQ01034045
198797
Gammaproteobacteria
TGG
Pro
>WENV170537158
CEWQ01017063
173617
Gammaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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