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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170551050
CXWF01085974
421153
Alphaproteobacteria
>WENV170550688
CXWF01013845
199865
Alphaproteobacteria
CAT
Met
>WENV170550919
CXWF01049364
237493
Alphaproteobacteria
CCA
Trp
>WENV170550544
CXWF01000313
254188
Alphaproteobacteria
CCA
Trp
>WENV170551048
CXWF01085809
412281
Alphaproteobacteria
CTG
Gln
>WENV170550969
CXWF01058390
339725
Alphaproteobacteria
GAA
Phe
>WENV170550956
CXWF01055947
377327
Alphaproteobacteria
GCC
Gly
>WENV170550871
CXWF01041886
10665
Alphaproteobacteria
GCT
Ser
>WENV170550986
CXWF01062526
21074
Alphaproteobacteria
GGA
Ser
>WENV170550875
CXWF01042536
147289
Alphaproteobacteria
GTC
Asp
>WENV170550700
CXWF01015148
162801
Alphaproteobacteria
GTG
His
>WENV170550901
CXWF01046648
303842
Alphaproteobacteria
TAC
Val
>WENV170550565
CXWF01001137
316120
Alphaproteobacteria
TGC
Ala
>WENV170550712
CXWF01016759
285832
Alphaproteobacteria
TGT
Thr
>WENV170550834
CXWF01035673
339724
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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