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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180011230
FLSK01000096
81880
Gammaproteobacteria
GAG
Leu
>WENV180011469
FLSK01003099
401437
Gammaproteobacteria
TTG
Gln
>WENV180011470
FLSK01003099
401437
Gammaproteobacteria
TTG
Gln
>WENV180011628
FLSK01010073
401437
Gammaproteobacteria
TTG
Gln
>WENV180011999
FLSK01123412
401437
Gammaproteobacteria
TTG
Gln
>WENV180011298
FLSK01001206
30640
Gammaproteobacteria
GGA
Ser
>WENV180011335
FLSK01001502
30640
Gammaproteobacteria
GGA
Ser
>WENV180011852
FLSK01066426
30640
Gammaproteobacteria
GGA
Ser
>WENV180012225
FLSK01279414
30640
Gammaproteobacteria
GGA
Ser
>WENV180012281
FLSK01322914
30640
Gammaproteobacteria
GGA
Ser
>WENV180012351
FLSK01376552
30640
Gammaproteobacteria
GGA
Ser
>WENV180012156
FLSK01219166
3276
Gammaproteobacteria
>WENV180012253
FLSK01299866
3276
Gammaproteobacteria
>WENV180011215
FLSK01000008
80672
Gammaproteobacteria
GAG
Leu
>WENV180011441
FLSK01003053
23665
Gammaproteobacteria
>WENV180011446
FLSK01003058
235793
Gammaproteobacteria
CAT
Met
>WENV180012120
FLSK01197311
150561
Gammaproteobacteria
ACG
Arg
>WENV180011447
FLSK01003058
3247
Gammaproteobacteria
GCT
Ser
>WENV180011476
FLSK01003113
58828
Gammaproteobacteria
TAA
Leu
>WENV180011482
FLSK01003121
58828
Gammaproteobacteria
TAA
Leu
>WENV180011538
FLSK01003714
58828
Gammaproteobacteria
TAA
Leu
>WENV180011574
FLSK01005655
58828
Gammaproteobacteria
TAA
Leu
>WENV180011419
FLSK01003029
146713
Gammaproteobacteria
GAC
Val
>WENV180011400
FLSK01002814
268376
Gammaproteobacteria
CTT
Lys
>WENV180011891
FLSK01081064
268376
Gammaproteobacteria
CTT
Lys
>WENV180012224
FLSK01278990
147761
Gammaproteobacteria
TGG
Pro
>WENV180011557
FLSK01004452
90409
Gammaproteobacteria
CAA
Leu
>WENV180011743
FLSK01036564
90409
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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