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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180018071
FSYC01000215
237154
Alphaproteobacteria
CTC
Glu
>WENV180018077
FSYC01000340
413198
Alphaproteobacteria
TCC
Gly
>WENV180018094
FSYC01000653
81096
Alphaproteobacteria
GAG
Leu
>WENV180018064
FSYC01000052
146597
Alphaproteobacteria
CAT
Met
>WENV180018083
FSYC01000400
359754
Alphaproteobacteria
TAC
Val
>WENV180018079
FSYC01000342
338631
Alphaproteobacteria
CAC
Val
>WENV180018066
FSYC01000112
352191
Alphaproteobacteria
GGT
Thr
>WENV180018089
FSYC01000603
166738
Alphaproteobacteria
CCT
Arg
>WENV180018095
FSYC01000655
418532
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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