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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170646328
JQGR01000012
339722
Alphaproteobacteria
TTG
Gln
>WENV170646329
JQGR01000014
82948
Alphaproteobacteria
CAA
Leu
>WENV170646330
JQGR01000016
23648
Alphaproteobacteria
CGA
Ser
>WENV170646331
JQGR01000018
237739
Alphaproteobacteria
CGT
Thr
>WENV170646333
JQGR01000022
339606
Alphaproteobacteria
>WENV170646334
JQGR01000022
339606
Alphaproteobacteria
>WENV170646336
JQGR01000029
23672
Alphaproteobacteria
GCT
Ser
>WENV170646338
JQGR01000039
281594
Alphaproteobacteria
TGT
Thr
>WENV170646343
JQGR01000051
113700
Alphaproteobacteria
>WENV170646344
JQGR01000057
23384
Alphaproteobacteria
GGA
Ser
>WENV170646346
JQGR01000064
147877
Alphaproteobacteria
GTG
His
>WENV170646347
JQGR01000071
147286
Alphaproteobacteria
CGG
Pro
>WENV170646348
JQGR01000073
127020
Alphaproteobacteria
TCT
Arg
>WENV170646351
JQGR01000132
236256
Alphaproteobacteria
TAC
Val
>WENV170646352
JQGR01000132
176908
Alphaproteobacteria
GTC
Asp
>WENV170646357
JQGR01000161
147083
Alphaproteobacteria
GGG
Pro
>WENV170646359
JQGR01000170
338760
Alphaproteobacteria
GAA
Phe
>WENV170646387
JQGR01000700
237740
Alphaproteobacteria
TTT
Lys
>WENV170646474
JQGR01011346
238010
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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