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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170684395
LFRM01035626
338486
Bacteroidota
CAT
Met
>WENV170686868
LFRM01168044
338486
Bacteroidota
CAT
Met
>WENV170684079
LFRM01018728
237247
Bacteroidota
TTT
Lys
>WENV170684088
LFRM01018833
237247
Bacteroidota
TTT
Lys
>WENV170685478
LFRM01094174
237247
Bacteroidota
TTT
Lys
>WENV170685479
LFRM01094174
237247
Bacteroidota
TTT
Lys
>WENV170688825
LFRM01263725
237247
Bacteroidota
TTT
Lys
>WENV170690842
LFRM01365137
344692
Bacteroidota
GGT
Thr
>WENV170684286
LFRM01030566
341950
Bacteroidota
>WENV170687019
LFRM01173483
341950
Bacteroidota
>WENV170689704
LFRM01307881
195529
Bacteroidota
CAT
Met
>WENV170684683
LFRM01052449
58714
Bacteroidota
CAA
Leu
>WENV170689779
LFRM01310972
58714
Bacteroidota
CAA
Leu
>WENV170683748
LFRM01002559
235165
Bacteroidota
CCA
Trp
>WENV170683790
LFRM01004873
235165
Bacteroidota
CCA
Trp
>WENV170687179
LFRM01181126
148247
Bacteroidota
TGC
Ala
>WENV170689232
LFRM01284901
148247
Bacteroidota
TGC
Ala
>WENV170687037
LFRM01174179
238553
Bacteroidota
GAA
Phe
>WENV170688202
LFRM01233787
145310
Bacteroidota
TGC
Ala
>WENV170689605
LFRM01303293
145310
Bacteroidota
TGC
Ala
>WENV170688916
LFRM01268340
338164
Bacteroidota
TTC
Glu
>WENV170691323
LFRM01392385
151121
Bacteroidota
CAT
Met
>WENV170684399
LFRM01036195
368991
Bacteroidota
TTC
Glu
>WENV170686282
LFRM01137227
354570
Bacteroidota
TTC
Glu
>WENV170688098
LFRM01227878
354570
Bacteroidota
TTC
Glu
>WENV170691420
LFRM01396679
354570
Bacteroidota
TTC
Glu
>WENV170686031
LFRM01122780
150485
Bacteroidota
GTT
Asn
>WENV170687802
LFRM01212199
150485
Bacteroidota
GTT
Asn
>WENV170687803
LFRM01212199
150485
Bacteroidota
GTT
Asn
>WENV170686125
LFRM01127509
339882
Bacteroidota
TTC
Glu
>WENV170690545
LFRM01347379
19317
Bacteroidota
GGA
Ser
>WENV170690715
LFRM01357865
19317
Bacteroidota
GGA
Ser
>WENV170689923
LFRM01318048
342206
Bacteroidota
TTC
Glu
>WENV170688140
LFRM01229730
48382
Bacteroidota
TGA
Ser
>WENV170690462
LFRM01342356
48382
Bacteroidota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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