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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170696215
LGVF01003674
185755
Gammaproteobacteria
GAT
Ile
>WENV170696223
LGVF01004335
95590
Gammaproteobacteria
>WENV170696226
LGVF01004498
236013
Gammaproteobacteria
TGC
Ala
>WENV170696241
LGVF01006752
273942
Gammaproteobacteria
GCC
Gly
>WENV170696262
LGVF01008371
236013
Gammaproteobacteria
TGC
Ala
>WENV170696937
LGVF01062589
236013
Gammaproteobacteria
TGC
Ala
>WENV170697055
LGVF01077392
281920
Gammaproteobacteria
CCA
Trp
>WENV170697239
LGVF01098557
108777
Gammaproteobacteria
TAG
Leu
>WENV170697496
LGVF01146045
281920
Gammaproteobacteria
CCA
Trp
>WENV170697529
LGVF01151550
236013
Gammaproteobacteria
TGC
Ala
>WENV170697556
LGVF01154848
97795
Gammaproteobacteria
GTA
Tyr
>WENV170697750
LGVF01187629
245151
Gammaproteobacteria
GTG
His
>WENV170698159
LGVF01274937
95866
Gammaproteobacteria
GTA
Tyr
>WENV170698714
LGVF01399712
313881
Gammaproteobacteria
GGC
Ala
>WENV170698715
LGVF01399712
270849
Gammaproteobacteria
TTC
Glu
>WENV170698796
LGVF01418490
147696
Gammaproteobacteria
CAT
Met
>WENV170699019
LGVF01462463
149066
Gammaproteobacteria
CAT
Met
>WENV170699465
LGVF01559051
339945
Gammaproteobacteria
TTG
Gln
>WENV170699533
LGVF01577056
243407
Gammaproteobacteria
TTT
Lys
>WENV170699921
LGVF01680600
146807
Gammaproteobacteria
TCT
Arg
>WENV170699922
LGVF01680600
350432
Gammaproteobacteria
GTG
His
>WENV170699923
LGVF01680831
152460
Gammaproteobacteria
GGG
Pro
>WENV170699930
LGVF01681669
283840
Gammaproteobacteria
TTC
Glu
>WENV170699942
LGVF01683175
147114
Gammaproteobacteria
CCT
Arg
>WENV170699943
LGVF01683336
16396
Gammaproteobacteria
TGA
Ser
>WENV170699945
LGVF01684496
158083
Gammaproteobacteria
ACG
Arg
>WENV170699947
LGVF01685299
268812
Gammaproteobacteria
GTT
Asn
>WENV170699959
LGVF01688863
113688
Gammaproteobacteria
GTA
Tyr
>WENV170699965
LGVF01691784
59172
Gammaproteobacteria
CAA
Leu
>WENV170699973
LGVF01693850
147328
Gammaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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