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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170787490
MDSV01019323
294226
Alphaproteobacteria
>WENV170800390
MDSV01229044
149985
Alphaproteobacteria
ACG
Arg
>WENV170787167
MDSV01014392
96640
Alphaproteobacteria
CAA
Leu
>WENV170787135
MDSV01013743
190043
Alphaproteobacteria
CAT
Met
>WENV170799395
MDSV01212922
237493
Alphaproteobacteria
CCA
Trp
>WENV170796117
MDSV01159375
241518
Alphaproteobacteria
CCA
Trp
>WENV170801015
MDSV01239724
147577
Alphaproteobacteria
CCG
Arg
>WENV170794497
MDSV01133023
144973
Alphaproteobacteria
CCT
Arg
>WENV170786305
MDSV01001072
235492
Alphaproteobacteria
GAA
Phe
>WENV170800044
MDSV01223486
348781
Alphaproteobacteria
GAA
Phe
>WENV170790303
MDSV01064107
426273
Alphaproteobacteria
GCA
Cys
>WENV170799281
MDSV01210819
365250
Alphaproteobacteria
GCC
Gly
>WENV170795204
MDSV01144439
28073
Alphaproteobacteria
GCT
Ser
>WENV170791824
MDSV01089430
10665
Alphaproteobacteria
GCT
Ser
>WENV170789685
MDSV01053839
21074
Alphaproteobacteria
GGA
Ser
>WENV170794579
MDSV01134318
192195
Alphaproteobacteria
GTC
Asp
>WENV170789895
MDSV01057196
150356
Alphaproteobacteria
GTC
Asp
>WENV170788561
MDSV01035757
184120
Alphaproteobacteria
GTG
His
>WENV170789259
MDSV01047370
184120
Alphaproteobacteria
GTG
His
>WENV170793233
MDSV01112744
184120
Alphaproteobacteria
GTG
His
>WENV170793418
MDSV01115820
184120
Alphaproteobacteria
GTG
His
>WENV170790302
MDSV01064107
341307
Alphaproteobacteria
GTT
Asn
>WENV170788220
MDSV01030026
193550
Alphaproteobacteria
TCT
Arg
>WENV170799782
MDSV01219335
150194
Alphaproteobacteria
TCT
Arg
>WENV170799525
MDSV01215035
165250
Alphaproteobacteria
TGG
Pro
>WENV170793406
MDSV01115668
341873
Alphaproteobacteria
TTC
Glu
>WENV170790559
MDSV01068242
238010
Alphaproteobacteria
TTT
Lys
>WENV170797376
MDSV01179515
266073
Alphaproteobacteria
TTT
Lys
>WENV170797422
MDSV01180114
266073
Alphaproteobacteria
TTT
Lys
>WENV170798217
MDSV01193201
266073
Alphaproteobacteria
TTT
Lys
>WENV170786956
MDSV01011010
266073
Alphaproteobacteria
TTT
Lys
>WENV170794701
MDSV01136292
235430
Alphaproteobacteria
TTT
Lys
>WENV170800562
MDSV01232348
235430
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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