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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
208 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170888737
MDTC01262944
146662
Gammaproteobacteria
GAC
Val
>WENV170880395
MDTC01112516
166654
Gammaproteobacteria
GAC
Val
>WENV170876208
MDTC01036476
183605
Gammaproteobacteria
CCG
Arg
>WENV170875415
MDTC01021201
235837
Gammaproteobacteria
GTT
Asn
>WENV170875965
MDTC01032201
238370
Gammaproteobacteria
TTT
Lys
>WENV170877588
MDTC01060868
238370
Gammaproteobacteria
TTT
Lys
>WENV170888885
MDTC01265755
238370
Gammaproteobacteria
TTT
Lys
>WENV170887063
MDTC01233168
165036
Gammaproteobacteria
CCA
Trp
>WENV170884215
MDTC01180063
188516
Gammaproteobacteria
CAT
Met
>WENV170884998
MDTC01194140
237766
Gammaproteobacteria
TAC
Val
>WENV170884999
MDTC01194140
237766
Gammaproteobacteria
TAC
Val
>WENV170878809
MDTC01083794
277725
Gammaproteobacteria
TAC
Val
>WENV170874229
MDTC01000175
282537
Gammaproteobacteria
TTC
Glu
>WENV170875599
MDTC01024715
146435
Gammaproteobacteria
TGG
Pro
>WENV170883255
MDTC01163059
279385
Gammaproteobacteria
TTT
Lys
>WENV170884961
MDTC01193478
283840
Gammaproteobacteria
TTC
Glu
>WENV170875830
MDTC01029540
236480
Gammaproteobacteria
GTG
His
>WENV170885024
MDTC01194439
101028
Gammaproteobacteria
GTA
Tyr
>WENV170888765
MDTC01263717
101028
Gammaproteobacteria
GTA
Tyr
>WENV170878689
MDTC01081453
238438
Gammaproteobacteria
>WENV170881103
MDTC01125291
238438
Gammaproteobacteria
>WENV170883145
MDTC01160702
238438
Gammaproteobacteria
>WENV170884503
MDTC01184379
238438
Gammaproteobacteria
>WENV170874994
MDTC01014470
283668
Gammaproteobacteria
TTT
Lys
>WENV170885945
MDTC01211641
58822
Gammaproteobacteria
CAA
Leu
>WENV170876402
MDTC01039200
17426
Gammaproteobacteria
GCT
Ser
>WENV170879559
MDTC01097019
17426
Gammaproteobacteria
GCT
Ser
>WENV170886348
MDTC01219938
17426
Gammaproteobacteria
GCT
Ser
>WENV170882641
MDTC01151609
244202
Gammaproteobacteria
TTT
Lys
>WENV170889426
MDTC01274670
61925
Gammaproteobacteria
TAA
Leu
>WENV170875835
MDTC01029591
147053
Gammaproteobacteria
GTT
Asn
>WENV170879772
MDTC01100881
147053
Gammaproteobacteria
GTT
Asn
>WENV170883555
MDTC01167981
147053
Gammaproteobacteria
GTT
Asn
>WENV170878128
MDTC01070576
145260
Gammaproteobacteria
CAT
Met
>WENV170882777
MDTC01153814
160030
Gammaproteobacteria
GGG
Pro
>WENV170882900
MDTC01155812
160030
Gammaproteobacteria
GGG
Pro
>WENV170887114
MDTC01234040
160030
Gammaproteobacteria
GGG
Pro
>WENV170888053
MDTC01250084
59177
Gammaproteobacteria
TAA
Leu
>WENV170875494
MDTC01022639
171935
Gammaproteobacteria
ACG
Arg
>WENV170877197
MDTC01053511
171935
Gammaproteobacteria
ACG
Arg
>WENV170879169
MDTC01090146
171935
Gammaproteobacteria
ACG
Arg
>WENV170880844
MDTC01121255
171935
Gammaproteobacteria
ACG
Arg
>WENV170881057
MDTC01124729
171935
Gammaproteobacteria
ACG
Arg
>WENV170889387
MDTC01274086
171935
Gammaproteobacteria
ACG
Arg
>WENV170877711
MDTC01063051
45109
Gammaproteobacteria
GGA
Ser
>WENV170875215
MDTC01017943
236366
Gammaproteobacteria
GTG
His
>WENV170888781
MDTC01264116
145367
Gammaproteobacteria
GGG
Pro
>WENV170877533
MDTC01059553
99112
Gammaproteobacteria
TAG
Leu
>WENV170886114
MDTC01214824
99112
Gammaproteobacteria
TAG
Leu
>WENV170889316
MDTC01272911
99112
Gammaproteobacteria
TAG
Leu
>WENV170882753
MDTC01153463
145196
Gammaproteobacteria
CAT
Met
>WENV170889181
MDTC01270791
147647
Gammaproteobacteria
CAT
Met
>WENV170884524
MDTC01184811
163940
Gammaproteobacteria
CCG
Arg
>WENV170877643
MDTC01061795
185163
Gammaproteobacteria
ACG
Arg
>WENV170889529
MDTC01276141
185163
Gammaproteobacteria
ACG
Arg
>WENV170881816
MDTC01137777
59211
Gammaproteobacteria
TAA
Leu
>WENV170874800
MDTC01011342
235452
Gammaproteobacteria
GAA
Phe
>WENV170874802
MDTC01011342
235452
Gammaproteobacteria
GAA
Phe
>WENV170880050
MDTC01105455
235452
Gammaproteobacteria
GAA
Phe
>WENV170888334
MDTC01255963
235452
Gammaproteobacteria
GAA
Phe
>WENV170889414
MDTC01274432
235452
Gammaproteobacteria
GAA
Phe
>WENV170879232
MDTC01091433
240619
Gammaproteobacteria
TGT
Thr
>WENV170882742
MDTC01153308
154268
Gammaproteobacteria
ACG
Arg
>WENV170880805
MDTC01120535
149036
Gammaproteobacteria
CCA
Trp
>WENV170882980
MDTC01157435
149036
Gammaproteobacteria
CCA
Trp
>WENV170883376
MDTC01165330
149036
Gammaproteobacteria
CCA
Trp
>WENV170874666
MDTC01009036
245602
Gammaproteobacteria
TTT
Lys
>WENV170888716
MDTC01262603
245602
Gammaproteobacteria
TTT
Lys
>WENV170876042
MDTC01033886
146791
Gammaproteobacteria
GAC
Val
>WENV170879623
MDTC01098241
148148
Gammaproteobacteria
GAC
Val
>WENV170881679
MDTC01135041
148148
Gammaproteobacteria
GAC
Val
>WENV170881922
MDTC01139973
148148
Gammaproteobacteria
GAC
Val
>WENV170879465
MDTC01095741
95861
Gammaproteobacteria
TAG
Leu
>WENV170875543
MDTC01023567
145261
Gammaproteobacteria
CAT
Met
>WENV170882764
MDTC01153576
147122
Gammaproteobacteria
GGG
Pro
>WENV170886948
MDTC01231047
147122
Gammaproteobacteria
GGG
Pro
>WENV170882968
MDTC01157293
16284
Gammaproteobacteria
TGA
Ser
>WENV170886187
MDTC01216386
17329
Gammaproteobacteria
TGA
Ser
>WENV170885899
MDTC01210871
145369
Gammaproteobacteria
CGG
Pro
>WENV170876648
MDTC01043969
270709
Gammaproteobacteria
GTG
His
>WENV170878653
MDTC01080935
237425
Gammaproteobacteria
TTC
Glu
>WENV170878654
MDTC01080935
237425
Gammaproteobacteria
TTC
Glu
>WENV170884431
MDTC01183472
237425
Gammaproteobacteria
TTC
Glu
>WENV170884432
MDTC01183472
237425
Gammaproteobacteria
TTC
Glu
>WENV170876053
MDTC01033961
174801
Gammaproteobacteria
TGG
Pro
>WENV170878687
MDTC01081453
45345
Gammaproteobacteria
GGA
Ser
>WENV170878451
MDTC01076781
185155
Gammaproteobacteria
CAT
Met
>WENV170880188
MDTC01108381
98737
Gammaproteobacteria
GAG
Leu
>WENV170879464
MDTC01095741
349693
Gammaproteobacteria
TTG
Gln
>WENV170880442
MDTC01113621
412799
Gammaproteobacteria
GCA
Cys
>WENV170889297
MDTC01272705
412376
Gammaproteobacteria
GCA
Cys
>WENV170880581
MDTC01116459
6976
Gammaproteobacteria
GCT
Ser
>WENV170876862
MDTC01047857
241230
Gammaproteobacteria
GAA
Phe
>WENV170884974
MDTC01193723
241230
Gammaproteobacteria
GAA
Phe
>WENV170880933
MDTC01122594
95983
Gammaproteobacteria
>WENV170886360
MDTC01220152
426403
Gammaproteobacteria
GCA
Cys
>WENV170884985
MDTC01193902
175987
Gammaproteobacteria
CGG
Pro
>WENV170875831
MDTC01029540
97031
Gammaproteobacteria
TAG
Leu
>WENV170878129
MDTC01070576
97031
Gammaproteobacteria
TAG
Leu
>WENV170878131
MDTC01070576
97031
Gammaproteobacteria
TAG
Leu
>WENV170880771
MDTC01119983
419491
Gammaproteobacteria
CTG
Gln
>WENV170880111
MDTC01106648
260238
Gammaproteobacteria
>WENV170883260
MDTC01163266
260238
Gammaproteobacteria
>WENV170886569
MDTC01223710
260238
Gammaproteobacteria
>WENV170874588
MDTC01007600
260238
Gammaproteobacteria
>WENV170874677
MDTC01009137
8043
Gammaproteobacteria
GCT
Ser
>WENV170875887
MDTC01030449
252289
Gammaproteobacteria
TTT
Lys
>WENV170877087
MDTC01051778
252289
Gammaproteobacteria
TTT
Lys
>WENV170877088
MDTC01051778
252289
Gammaproteobacteria
TTT
Lys
>WENV170888700
MDTC01262252
252289
Gammaproteobacteria
TTT
Lys
>WENV170875828
MDTC01029540
149038
Gammaproteobacteria
TGG
Pro
>WENV170879461
MDTC01095653
149038
Gammaproteobacteria
TGG
Pro
>WENV170874801
MDTC01011342
278046
Gammaproteobacteria
TGT
Thr
>WENV170881355
MDTC01129615
278046
Gammaproteobacteria
TGT
Thr
>WENV170885616
MDTC01205755
278046
Gammaproteobacteria
TGT
Thr
>WENV170886960
MDTC01231190
278046
Gammaproteobacteria
TGT
Thr
>WENV170889415
MDTC01274432
278046
Gammaproteobacteria
TGT
Thr
>WENV170887752
MDTC01245256
411766
Gammaproteobacteria
GCA
Cys
>WENV170880534
MDTC01115387
150587
Gammaproteobacteria
CAT
Met
>WENV170885359
MDTC01200647
150587
Gammaproteobacteria
CAT
Met
>WENV170875296
MDTC01019202
269152
Gammaproteobacteria
GTG
His
>WENV170884582
MDTC01185815
269152
Gammaproteobacteria
GTG
His
>WENV170874848
MDTC01012256
238510
Gammaproteobacteria
GCC
Gly
>WENV170875256
MDTC01018486
238510
Gammaproteobacteria
GCC
Gly
>WENV170876912
MDTC01048756
238510
Gammaproteobacteria
GCC
Gly
>WENV170876913
MDTC01048756
238510
Gammaproteobacteria
GCC
Gly
>WENV170884818
MDTC01190377
238510
Gammaproteobacteria
GCC
Gly
>WENV170879234
MDTC01091433
412476
Gammaproteobacteria
TCC
Gly
>WENV170874880
MDTC01012825
173040
Gammaproteobacteria
GAC
Val
>WENV170881768
MDTC01136827
173040
Gammaproteobacteria
GAC
Val
>WENV170889004
MDTC01267775
173040
Gammaproteobacteria
GAC
Val
>WENV170888078
MDTC01250609
99961
Gammaproteobacteria
GAG
Leu
>WENV170880934
MDTC01122594
346720
Gammaproteobacteria
TCC
Gly
>WENV170877332
MDTC01055938
165387
Gammaproteobacteria
CCT
Arg
>WENV170885155
MDTC01196720
341782
Gammaproteobacteria
TTG
Gln
>WENV170879313
MDTC01092765
145713
Gammaproteobacteria
CAT
Met
>WENV170883467
MDTC01166621
145713
Gammaproteobacteria
CAT
Met
>WENV170885990
MDTC01212560
145713
Gammaproteobacteria
CAT
Met
>WENV170874317
MDTC01002063
411842
Gammaproteobacteria
GCA
Cys
>WENV170876536
MDTC01041763
411842
Gammaproteobacteria
GCA
Cys
>WENV170882835
MDTC01154822
411842
Gammaproteobacteria
GCA
Cys
>WENV170879075
MDTC01088792
278793
Gammaproteobacteria
GTG
His
>WENV170876436
MDTC01039786
250885
Gammaproteobacteria
TGC
Ala
>WENV170876695
MDTC01044933
250885
Gammaproteobacteria
TGC
Ala
>WENV170880126
MDTC01106877
250885
Gammaproteobacteria
TGC
Ala
>WENV170889235
MDTC01271803
147123
Gammaproteobacteria
CAT
Met
>WENV170887227
MDTC01235982
235886
Gammaproteobacteria
TTC
Glu
>WENV170880518
MDTC01115027
425813
Gammaproteobacteria
GCA
Cys
>WENV170888418
MDTC01257204
425813
Gammaproteobacteria
GCA
Cys
>WENV170888795
MDTC01264266
425813
Gammaproteobacteria
GCA
Cys
>WENV170882566
MDTC01150907
151889
Gammaproteobacteria
CAT
Met
>WENV170875829
MDTC01029540
154796
Gammaproteobacteria
TCT
Arg
>WENV170888932
MDTC01266440
238372
Gammaproteobacteria
CCT
Arg
>WENV170880440
MDTC01113461
182320
Gammaproteobacteria
CAT
Met
>WENV170885713
MDTC01207417
236248
Gammaproteobacteria
TTT
Lys
>WENV170888853
MDTC01265217
189760
Gammaproteobacteria
TGG
Pro
>WENV170874388
MDTC01003717
186449
Gammaproteobacteria
TGG
Pro
>WENV170875399
MDTC01020907
186449
Gammaproteobacteria
TGG
Pro
>WENV170889490
MDTC01275333
186449
Gammaproteobacteria
TGG
Pro
>WENV170878247
MDTC01072684
128930
Gammaproteobacteria
GTC
Asp
>WENV170883192
MDTC01161471
128930
Gammaproteobacteria
GTC
Asp
>WENV170877571
MDTC01060594
243485
Gammaproteobacteria
TGT
Thr
>WENV170879284
MDTC01092407
243485
Gammaproteobacteria
TGT
Thr
>WENV170881789
MDTC01137265
243485
Gammaproteobacteria
TGT
Thr
>WENV170884168
MDTC01179110
243485
Gammaproteobacteria
TGT
Thr
>WENV170878681
MDTC01081400
240082
Gammaproteobacteria
TTT
Lys
>WENV170887285
MDTC01237447
240082
Gammaproteobacteria
TTT
Lys
>WENV170887286
MDTC01237447
240082
Gammaproteobacteria
TTT
Lys
>WENV170881237
MDTC01127672
146807
Gammaproteobacteria
TCT
Arg
>WENV170878936
MDTC01086392
184454
Gammaproteobacteria
ACG
Arg
>WENV170882295
MDTC01146754
184454
Gammaproteobacteria
ACG
Arg
>WENV170879958
MDTC01103632
243921
Gammaproteobacteria
TTT
Lys
>WENV170877002
MDTC01050234
59658
Gammaproteobacteria
CAA
Leu
>WENV170878553
MDTC01078940
268904
Gammaproteobacteria
GTG
His
>WENV170882675
MDTC01152189
237421
Gammaproteobacteria
TGT
Thr
>WENV170883124
MDTC01160235
237421
Gammaproteobacteria
TGT
Thr
>WENV170883808
MDTC01172879
237421
Gammaproteobacteria
TGT
Thr
>WENV170885161
MDTC01196835
237421
Gammaproteobacteria
TGT
Thr
>WENV170887952
MDTC01248809
237421
Gammaproteobacteria
TGT
Thr
>WENV170882536
MDTC01150473
339623
Gammaproteobacteria
TTG
Gln
>WENV170882537
MDTC01150473
339623
Gammaproteobacteria
TTG
Gln
>WENV170886026
MDTC01213148
247088
Gammaproteobacteria
CCA
Trp
>WENV170876623
MDTC01043455
247088
Gammaproteobacteria
CCA
Trp
>WENV170883558
MDTC01168124
182592
Gammaproteobacteria
GAC
Val
>WENV170874418
MDTC01004447
149037
Gammaproteobacteria
GAC
Val
>WENV170878583
MDTC01079397
149037
Gammaproteobacteria
GAC
Val
>WENV170876312
MDTC01038001
411735
Gammaproteobacteria
GCA
Cys
>WENV170877933
MDTC01067076
411735
Gammaproteobacteria
GCA
Cys
>WENV170880782
MDTC01120121
411735
Gammaproteobacteria
GCA
Cys
>WENV170884492
MDTC01184254
411735
Gammaproteobacteria
GCA
Cys
>WENV170883205
MDTC01161812
101786
Gammaproteobacteria
GAG
Leu
>WENV170879700
MDTC01099559
163580
Gammaproteobacteria
GAC
Val
>WENV170882667
MDTC01152134
163580
Gammaproteobacteria
GAC
Val
>WENV170877397
MDTC01057207
147112
Gammaproteobacteria
GGG
Pro
>WENV170889491
MDTC01275333
150297
Gammaproteobacteria
TCT
Arg
>WENV170875302
MDTC01019245
17756
Gammaproteobacteria
TGA
Ser
>WENV170874547
MDTC01006705
45152
Gammaproteobacteria
GGA
Ser
>WENV170875585
MDTC01024252
266766
Gammaproteobacteria
TGT
Thr
>WENV170875130
MDTC01016535
277196
Gammaproteobacteria
GAA
Phe
>WENV170877050
MDTC01051230
277196
Gammaproteobacteria
GAA
Phe
>WENV170882538
MDTC01150473
59175
Gammaproteobacteria
CAG
Leu
>WENV170884780
MDTC01189497
59175
Gammaproteobacteria
CAG
Leu
>WENV170882834
MDTC01154822
270352
Gammaproteobacteria
GCC
Gly
>WENV170886959
MDTC01231190
270352
Gammaproteobacteria
GCC
Gly
>WENV170881925
MDTC01140078
173617
Gammaproteobacteria
GTC
Asp
>WENV170882291
MDTC01146663
173617
Gammaproteobacteria
GTC
Asp
>WENV170879235
MDTC01091433
239187
Gammaproteobacteria
GGT
Thr
>WENV170883869
MDTC01174299
147127
Gammaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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