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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170904828
MDTE01017201
183605
Gammaproteobacteria
CCG
Arg
>WENV170908084
MDTE01060249
299821
Gammaproteobacteria
TTC
Glu
>WENV170908086
MDTE01060249
299821
Gammaproteobacteria
TTC
Glu
>WENV170908090
MDTE01060249
299821
Gammaproteobacteria
TTC
Glu
>WENV170914634
MDTE01151323
299821
Gammaproteobacteria
TTC
Glu
>WENV170912444
MDTE01120979
235887
Gammaproteobacteria
GTG
His
>WENV170910649
MDTE01095026
266356
Gammaproteobacteria
GAA
Phe
>WENV170916976
MDTE01185809
146435
Gammaproteobacteria
TGG
Pro
>WENV170914284
MDTE01146266
279385
Gammaproteobacteria
TTT
Lys
>WENV170914285
MDTE01146266
279385
Gammaproteobacteria
TTT
Lys
>WENV170911988
MDTE01113907
199984
Gammaproteobacteria
CAT
Met
>WENV170910023
MDTE01085995
145368
Gammaproteobacteria
CCT
Arg
>WENV170908746
MDTE01068659
249887
Gammaproteobacteria
GGT
Thr
>WENV170903648
MDTE01001185
58822
Gammaproteobacteria
CAA
Leu
>WENV170903904
MDTE01004473
244202
Gammaproteobacteria
TTT
Lys
>WENV170909916
MDTE01084731
290337
Gammaproteobacteria
TAC
Val
>WENV170910726
MDTE01096078
147053
Gammaproteobacteria
GTT
Asn
>WENV170910727
MDTE01096078
147053
Gammaproteobacteria
GTT
Asn
>WENV170914425
MDTE01148363
108171
Gammaproteobacteria
GTA
Tyr
>WENV170913048
MDTE01129252
160030
Gammaproteobacteria
GGG
Pro
>WENV170913701
MDTE01138076
147114
Gammaproteobacteria
CCT
Arg
>WENV170913828
MDTE01139701
145367
Gammaproteobacteria
GGG
Pro
>WENV170909403
MDTE01077778
269248
Gammaproteobacteria
CCA
Trp
>WENV170912952
MDTE01128032
145196
Gammaproteobacteria
CAT
Met
>WENV170904340
MDTE01010875
147647
Gammaproteobacteria
CAT
Met
>WENV170911434
MDTE01105865
163940
Gammaproteobacteria
CCG
Arg
>WENV170907210
MDTE01048929
59172
Gammaproteobacteria
CAA
Leu
>WENV170917598
MDTE01194736
417674
Gammaproteobacteria
GCA
Cys
>WENV170910230
MDTE01089035
240642
Gammaproteobacteria
GTT
Asn
>WENV170911290
MDTE01103663
240642
Gammaproteobacteria
GTT
Asn
>WENV170911777
MDTE01111250
240642
Gammaproteobacteria
GTT
Asn
>WENV170911294
MDTE01103759
307413
Gammaproteobacteria
TTT
Lys
>WENV170912145
MDTE01116462
149036
Gammaproteobacteria
CCA
Trp
>WENV170915300
MDTE01161508
149036
Gammaproteobacteria
CCA
Trp
>WENV170914158
MDTE01144179
146791
Gammaproteobacteria
GAC
Val
>WENV170913590
MDTE01136770
145366
Gammaproteobacteria
ACG
Arg
>WENV170913591
MDTE01136770
145366
Gammaproteobacteria
ACG
Arg
>WENV170914786
MDTE01153841
145366
Gammaproteobacteria
ACG
Arg
>WENV170910061
MDTE01086543
16284
Gammaproteobacteria
TGA
Ser
>WENV170916502
MDTE01178804
145369
Gammaproteobacteria
CGG
Pro
>WENV170904893
MDTE01018287
69672
Gammaproteobacteria
TAA
Leu
>WENV170909895
MDTE01084424
69672
Gammaproteobacteria
TAA
Leu
>WENV170910315
MDTE01090298
69672
Gammaproteobacteria
TAA
Leu
>WENV170908027
MDTE01059691
270709
Gammaproteobacteria
GTG
His
>WENV170908542
MDTE01066153
98737
Gammaproteobacteria
GAG
Leu
>WENV170909963
MDTE01085313
412799
Gammaproteobacteria
GCA
Cys
>WENV170909215
MDTE01075253
340801
Gammaproteobacteria
CCT
Arg
>WENV170910543
MDTE01093813
245841
Gammaproteobacteria
GAA
Phe
>WENV170907192
MDTE01048817
426403
Gammaproteobacteria
GCA
Cys
>WENV170912679
MDTE01124048
426403
Gammaproteobacteria
GCA
Cys
>WENV170916235
MDTE01175328
426403
Gammaproteobacteria
GCA
Cys
>WENV170913074
MDTE01129462
175987
Gammaproteobacteria
CGG
Pro
>WENV170915243
MDTE01160561
252289
Gammaproteobacteria
TTT
Lys
>WENV170906875
MDTE01044879
145237
Gammaproteobacteria
CAT
Met
>WENV170914464
MDTE01148858
268812
Gammaproteobacteria
GTT
Asn
>WENV170914465
MDTE01148858
268812
Gammaproteobacteria
GTT
Asn
>WENV170917545
MDTE01194111
147118
Gammaproteobacteria
GAC
Val
>WENV170917546
MDTE01194111
147118
Gammaproteobacteria
GAC
Val
>WENV170918307
MDTE01204531
165387
Gammaproteobacteria
CCT
Arg
>WENV170909543
MDTE01079588
113688
Gammaproteobacteria
GTA
Tyr
>WENV170913500
MDTE01135274
241136
Gammaproteobacteria
TTG
Gln
>WENV170914476
MDTE01148980
250885
Gammaproteobacteria
TGC
Ala
>WENV170908523
MDTE01065748
235886
Gammaproteobacteria
TTC
Glu
>WENV170913610
MDTE01136990
425813
Gammaproteobacteria
GCA
Cys
>WENV170917759
MDTE01196979
151889
Gammaproteobacteria
CAT
Met
>WENV170906095
MDTE01033947
195303
Gammaproteobacteria
GAT
Ile
>WENV170914337
MDTE01146914
195303
Gammaproteobacteria
GAT
Ile
>WENV170917782
MDTE01197294
128930
Gammaproteobacteria
GTC
Asp
>WENV170912578
MDTE01122837
243485
Gammaproteobacteria
TGT
Thr
>WENV170903995
MDTE01006062
146807
Gammaproteobacteria
TCT
Arg
>WENV170905889
MDTE01030935
59658
Gammaproteobacteria
CAA
Leu
>WENV170910207
MDTE01088723
203054
Gammaproteobacteria
ACG
Arg
>WENV170910208
MDTE01088723
203054
Gammaproteobacteria
ACG
Arg
>WENV170916390
MDTE01177426
149037
Gammaproteobacteria
GAC
Val
>WENV170916889
MDTE01184497
245151
Gammaproteobacteria
GTG
His
>WENV170912092
MDTE01115358
411735
Gammaproteobacteria
GCA
Cys
>WENV170913479
MDTE01135007
147112
Gammaproteobacteria
GGG
Pro
>WENV170904130
MDTE01007994
198797
Gammaproteobacteria
TGG
Pro
>WENV170912442
MDTE01120979
198797
Gammaproteobacteria
TGG
Pro
>WENV170913170
MDTE01130808
198797
Gammaproteobacteria
TGG
Pro
>WENV170916887
MDTE01184497
198797
Gammaproteobacteria
TGG
Pro
>WENV170906766
MDTE01043206
175414
Gammaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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