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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180103267
OAPA01011484
186463
Actinomycetota
GAT
Ile
>WENV180103064
OAPA01000893
417127
Actinomycetota
CCC
Gly
>WENV180103032
OAPA01000249
338762
Actinomycetota
CTG
Gln
>WENV180103178
OAPA01005054
236241
Actinomycetota
TAC
Val
>WENV180103018
OAPA01000119
425058
Actinomycetota
GCA
Cys
>WENV180103043
OAPA01000461
374962
Actinomycetota
CCT
Arg
>WENV180103115
OAPA01002296
379302
Actinomycetota
GAC
Val
>WENV180103082
OAPA01001429
248046
Actinomycetota
CCA
Trp
>WENV180103464
OAPA01043361
290785
Actinomycetota
TTT
Lys
>WENV180103174
OAPA01004708
104906
Actinomycetota
GTA
Tyr
>WENV180103019
OAPA01000119
344380
Actinomycetota
GAC
Val
>WENV180103268
OAPA01011484
245559
Actinomycetota
TGC
Ala
>WENV180103013
OAPA01000093
56123
Actinomycetota
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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