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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180121391
OASR01000566
243647
Bacillota
TTT
Lys
>WENV180121398
OASR01000608
243647
Bacillota
TTT
Lys
>WENV180121430
OASR01001184
26899
Bacillota
GGA
Ser
>WENV180121368
OASR01000278
16842
Bacillota
CGA
Ser
>WENV180121455
OASR01005556
339904
Bacillota
GCC
Gly
>WENV180121354
OASR01000199
37213
Bacillota
TGA
Ser
>WENV180121477
OASR01010029
340021
Bacillota
CTC
Glu
>WENV180121387
OASR01000551
235693
Bacillota
GGT
Thr
>WENV180121245
OASR01000029
267556
Bacillota
TAC
Val
>WENV180121468
OASR01007011
338152
Bacillota
TTC
Glu
>WENV180121461
OASR01005817
338544
Bacillota
TGT
Thr
>WENV180121422
OASR01001005
235137
Bacillota
TGC
Ala
>WENV180121277
OASR01000048
340802
Bacillota
TTG
Gln
>WENV180121454
OASR01005556
235903
Bacillota
TTT
Lys
>WENV180121460
OASR01005817
145606
Bacillota
GTC
Asp
>WENV180121403
OASR01000664
16834
Bacillota
GCT
Ser
>WENV180121449
OASR01003390
268272
Bacillota
TGC
Ala
>WENV180121224
OASR01000003
359258
Bacillota
TTG
Gln
>WENV180121231
OASR01000003
359258
Bacillota
TTG
Gln
>WENV180121276
OASR01000048
156937
Bacillota
GTG
His
>WENV180121393
OASR01000566
243612
Bacillota
TAC
Val
>WENV180121370
OASR01000282
147135
Bacillota
ACG
Arg
>WENV180121458
OASR01005556
338548
Bacillota
TTG
Gln
>WENV180121395
OASR01000585
342895
Bacillota
CAT
Met
>WENV180121409
OASR01000836
250349
Bacillota
GAA
Phe
>WENV180121459
OASR01005817
258868
Bacillota
TAC
Val
>WENV180121432
OASR01001269
238413
Bacillota
GGT
Thr
>WENV180121408
OASR01000836
235197
Bacillota
GTC
Asp
>WENV180121456
OASR01005556
411739
Bacillota
TCC
Gly
>WENV180121470
OASR01007308
235506
Bacillota
TGC
Ala
>WENV180121396
OASR01000608
243613
Bacillota
GTG
His
>WENV180121275
OASR01000048
144672
Bacillota
TCT
Arg
>WENV180121388
OASR01000551
152491
Bacillota
CAT
Met
>WENV180121462
OASR01005817
338545
Bacillota
>WENV180121305
OASR01000069
174818
Bacillota
CAT
Met
>WENV180121242
OASR01000021
338533
Bacillota
CCT
Arg
>WENV180121397
OASR01000608
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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