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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180283476
OBID01000219
155696
Gammaproteobacteria
TCT
Arg
>WENV180285313
OBID01328702
239236
Gammaproteobacteria
>WENV180285864
OBID01772997
163492
Gammaproteobacteria
TGG
Pro
>WENV180286042
OBID01938712
359124
Gammaproteobacteria
TTG
Gln
>WENV180285551
OBID01519624
144784
Gammaproteobacteria
CAT
Met
>WENV180283701
OBID01001760
282537
Gammaproteobacteria
TTC
Glu
>WENV180285339
OBID01341724
283668
Gammaproteobacteria
TTT
Lys
>WENV180285614
OBID01566570
144790
Gammaproteobacteria
CGG
Pro
>WENV180285321
OBID01331801
17426
Gammaproteobacteria
GCT
Ser
>WENV180286041
OBID01938678
144788
Gammaproteobacteria
>WENV180285608
OBID01560857
162284
Gammaproteobacteria
CCA
Trp
>WENV180285494
OBID01461322
144793
Gammaproteobacteria
GAC
Val
>WENV180285493
OBID01461322
151913
Gammaproteobacteria
GAC
Val
>WENV180285207
OBID01276503
277276
Gammaproteobacteria
CTC
Glu
>WENV180283821
OBID01003688
353410
Gammaproteobacteria
CTG
Gln
>WENV180283490
OBID01000299
16238
Gammaproteobacteria
CGA
Ser
>WENV180285314
OBID01328702
235319
Gammaproteobacteria
TAC
Val
>WENV180284029
OBID01011699
152286
Gammaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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