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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181165556
OEIS01031780
199776
Alphaproteobacteria
CGG
Pro
>WENV181165947
OEIS01316374
203135
Alphaproteobacteria
TCT
Arg
>WENV181166171
OEIS01520539
190043
Alphaproteobacteria
CAT
Met
>WENV181165460
OEIS01001678
342732
Alphaproteobacteria
CCC
Gly
>WENV181165555
OEIS01031497
175748
Alphaproteobacteria
CAT
Met
>WENV181165623
OEIS01067161
95924
Alphaproteobacteria
GAG
Leu
>WENV181165868
OEIS01245518
59118
Alphaproteobacteria
CAG
Leu
>WENV181165482
OEIS01006391
131431
Alphaproteobacteria
GGG
Pro
>WENV181165908
OEIS01281147
338268
Alphaproteobacteria
GAC
Val
>WENV181165789
OEIS01179323
96994
Alphaproteobacteria
TAG
Leu
>WENV181165946
OEIS01314256
192195
Alphaproteobacteria
GTC
Asp
>WENV181165607
OEIS01059364
257082
Alphaproteobacteria
TAC
Val
>WENV181165935
OEIS01301079
23611
Alphaproteobacteria
CGA
Ser
>WENV181165890
OEIS01262505
339464
Alphaproteobacteria
GCC
Gly
>WENV181165949
OEIS01317242
259072
Alphaproteobacteria
CGC
Ala
>WENV181165914
OEIS01286070
345469
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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