This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181429273
OGCX01000665
24650
Bacillota
TAA
Leu
>WENV181429471
OGCX01006041
196621
Bacillota
GTC
Asp
>WENV181429207
OGCX01000218
16842
Bacillota
CGA
Ser
>WENV181429311
OGCX01001219
16842
Bacillota
CGA
Ser
>WENV181429136
OGCX01000041
240192
Bacillota
CTG
Gln
>WENV181429284
OGCX01000912
144612
Bacillota
TCT
Arg
>WENV181429124
OGCX01000033
267649
Bacillota
TAC
Val
>WENV181429126
OGCX01000033
267649
Bacillota
TAC
Val
>WENV181429119
OGCX01000029
339890
Bacillota
TTG
Gln
>WENV181429153
OGCX01000063
147487
Bacillota
ACG
Arg
>WENV181429154
OGCX01000063
147487
Bacillota
ACG
Arg
>WENV181429360
OGCX01001893
235098
Bacillota
GAC
Val
>WENV181429361
OGCX01001895
235098
Bacillota
GAC
Val
>WENV181429401
OGCX01002980
235098
Bacillota
GAC
Val
>WENV181429486
OGCX01006825
235098
Bacillota
GAC
Val
>WENV181429302
OGCX01001151
44854
Bacillota
TGA
Ser
>WENV181429147
OGCX01000057
238489
Bacillota
GTC
Asp
>WENV181429310
OGCX01001212
304022
Bacillota
GCC
Gly
>WENV181429572
OGCX01019427
152047
Bacillota
GGG
Pro
>WENV181429556
OGCX01016353
235137
Bacillota
TGC
Ala
>WENV181429474
OGCX01006234
241761
Bacillota
TAC
Val
>WENV181429138
OGCX01000043
149311
Bacillota
CCT
Arg
>WENV181429135
OGCX01000041
149310
Bacillota
TCT
Arg
>WENV181429545
OGCX01014850
127105
Bacillota
GTG
His
>WENV181429106
OGCX01000022
302152
Bacillota
CTT
Lys
>WENV181429107
OGCX01000022
302152
Bacillota
CTT
Lys
>WENV181429150
OGCX01000063
238211
Bacillota
TGT
Thr
>WENV181429346
OGCX01001676
429429
Bacillota
CCA
Trp
>WENV181429232
OGCX01000319
16834
Bacillota
GCT
Ser
>WENV181429283
OGCX01000907
16834
Bacillota
GCT
Ser
>WENV181429514
OGCX01009634
11034
Bacillota
GGA
Ser
>WENV181429233
OGCX01000327
114002
Bacillota
CAA
Leu
>WENV181429272
OGCX01000652
114002
Bacillota
CAA
Leu
>WENV181429359
OGCX01001883
114002
Bacillota
CAA
Leu
>WENV181429314
OGCX01001255
37437
Bacillota
TAA
Leu
>WENV181429340
OGCX01001541
37437
Bacillota
TAA
Leu
>WENV181429309
OGCX01001212
235079
Bacillota
GAA
Phe
>WENV181429397
OGCX01002966
296878
Bacillota
GTT
Asn
>WENV181429399
OGCX01002966
243612
Bacillota
TAC
Val
>WENV181429592
OGCX01029351
338149
Bacillota
CTC
Glu
>WENV181429265
OGCX01000619
245298
Bacillota
CGG
Pro
>WENV181429089
OGCX01000010
287000
Bacillota
GTT
Asn
>WENV181429156
OGCX01000063
149309
Bacillota
CGG
Pro
>WENV181429462
OGCX01005617
147135
Bacillota
ACG
Arg
>WENV181429149
OGCX01000063
240190
Bacillota
TTT
Lys
>WENV181429083
OGCX01000003
301373
Bacillota
CTC
Glu
>WENV181429264
OGCX01000619
411547
Bacillota
CTG
Gln
>WENV181429402
OGCX01002983
411547
Bacillota
CTG
Gln
>WENV181429303
OGCX01001151
4624
Bacillota
GCT
Ser
>WENV181429205
OGCX01000214
342895
Bacillota
CAT
Met
>WENV181429344
OGCX01001624
342895
Bacillota
CAT
Met
>WENV181429345
OGCX01001662
342895
Bacillota
CAT
Met
>WENV181429082
OGCX01000003
37363
Bacillota
AAG
Leu
>WENV181429076
OGCX01000002
412886
Bacillota
CCC
Gly
>WENV181429180
OGCX01000150
412387
Bacillota
GCA
Cys
>WENV181429553
OGCX01016033
248683
Bacillota
TTT
Lys
>WENV181429159
OGCX01000066
18852
Bacillota
GCT
Ser
>WENV181429170
OGCX01000095
18852
Bacillota
GCT
Ser
>WENV181429371
OGCX01002121
235095
Bacillota
GGT
Thr
>WENV181429419
OGCX01003437
235095
Bacillota
GGT
Thr
>WENV181429472
OGCX01006041
235095
Bacillota
GGT
Thr
>WENV181429549
OGCX01015379
185292
Bacillota
ACG
Arg
>WENV181429409
OGCX01003249
411549
Bacillota
TTG
Gln
>WENV181429442
OGCX01004429
411549
Bacillota
TTG
Gln
>WENV181429458
OGCX01005355
411549
Bacillota
TTG
Gln
>WENV181429078
OGCX01000003
85288
Bacillota
GTA
Tyr
>WENV181429080
OGCX01000003
240193
Bacillota
GTG
His
>WENV181429276
OGCX01000779
148188
Bacillota
CCG
Arg
>WENV181429580
OGCX01023659
152046
Bacillota
TCT
Arg
>WENV181429536
OGCX01013025
237846
Bacillota
GCC
Gly
>WENV181429339
OGCX01001537
80612
Bacillota
GTA
Tyr
>WENV181429213
OGCX01000230
235127
Bacillota
TTT
Lys
>WENV181429243
OGCX01000454
235197
Bacillota
GTC
Asp
>WENV181429531
OGCX01011890
152051
Bacillota
ACG
Arg
>WENV181429148
OGCX01000063
240191
Bacillota
GGT
Thr
>WENV181429368
OGCX01002077
235124
Bacillota
TGG
Pro
>WENV181429498
OGCX01008330
235124
Bacillota
TGG
Pro
>WENV181429570
OGCX01019409
137717
Bacillota
GAT
Ile
>WENV181429077
OGCX01000002
16596
Bacillota
CGA
Ser
>WENV181429313
OGCX01001252
338129
Bacillota
TGT
Thr
>WENV181429236
OGCX01000362
258820
Bacillota
CGT
Thr
>WENV181429146
OGCX01000057
59727
Bacillota
CAG
Leu
>WENV181429443
OGCX01004473
144583
Bacillota
ACG
Arg
>WENV181429470
OGCX01006041
235171
Bacillota
CCA
Trp
>WENV181429391
OGCX01002720
144621
Bacillota
GTT
Asn
>WENV181429354
OGCX01001752
58712
Bacillota
CAG
Leu
>WENV181429372
OGCX01002154
58712
Bacillota
CAG
Leu
>WENV181429505
OGCX01008573
245296
Bacillota
CCC
Gly
>WENV181429327
OGCX01001325
144594
Bacillota
CAC
Val
>WENV181429341
OGCX01001548
144594
Bacillota
CAC
Val
>WENV181429194
OGCX01000195
413657
Bacillota
CCC
Gly
>WENV181429329
OGCX01001396
413657
Bacillota
CCC
Gly
>WENV181429390
OGCX01002694
413657
Bacillota
CCC
Gly
>WENV181429081
OGCX01000003
375269
Bacillota
TTG
Gln
>WENV181429079
OGCX01000003
412118
Bacillota
>WENV181429203
OGCX01000212
45160
Bacillota
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK